RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 CCDC63Q8NA47 563 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 SLC2A12Q8TD20 617 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 PTPMT1Q8WUK0 201 aaPredicted RBP10.44□□□□□ -0.74
RFFL-204ENST00000414419 ANKRD9Q96BM1 317 aaPredicted RBP10.44□□□□□ -0.74
RFFL-204ENST00000414419 SCMH1Q96GD3 660 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 ART5Q96L15 291 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 SLX1AQ9BQ83 275 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 PELOQ9BRX2 385 aaKnown RBP10.44□□□□□ -0.74
RFFL-204ENST00000414419 BRF2Q9HAW0 419 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 TRPS1Q9UHF7 1281 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 GRID1Q9ULK0 1009 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 ERVK-11Q9UQG0 969 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 OSGIN2Q9Y236 505 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 SLC5A6Q9Y289 635 aa10.44□□□□□ -0.74
RFFL-204ENST00000414419 YARS2Q9Y2Z4 477 aaKnown RBP10.44□□□□□ -0.74
RFFL-204ENST00000414419 SPENQ96T58 3664 aaKnown RBP10.44□□□□□ -0.74
RFFL-204ENST00000414419 SETXQ7Z333 2677 aaKnown RBP10.44□□□□□ -0.74
RFFL-204ENST00000414419 USP9XQ93008 2570 aaPredicted RBP10.44□□□□□ -0.74
RFFL-204ENST00000414419 HECTD1Q9ULT8 2610 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 TLDC2A0PJX2 215 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 CCDC151A5D8V7 595 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 PPP6CO00743 305 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 COPEO14579 308 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 TMPRSS11DO60235 418 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 OR10H2O60403 315 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 CDH16O75309 829 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 GUCY1B2O75343 617 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 ULK1O75385 1050 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 NEURL1O76050 574 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 SLU7O95391 586 aaKnown RBP10.43□□□□□ -0.74
RFFL-204ENST00000414419 GPR75O95800 540 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 DDAH2O95865 285 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 PDYNP01213 254 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 KLK1P06870 262 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 MYL2P10916 166 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 ALOX15P16050 662 aaPredicted RBP10.43□□□□□ -0.74
RFFL-204ENST00000414419 PIK3R1P27986 724 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 TRHRP34981 398 aaPredicted RBP10.43□□□□□ -0.74
RFFL-204ENST00000414419 MAPK12P53778 367 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 PRKAA2P54646 552 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 NAA20P61599 178 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 PMP22Q01453 160 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 ALDH6A1Q02252 535 aaKnown RBP10.43□□□□□ -0.74
RFFL-204ENST00000414419 RBPJQ06330 500 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 CCDC153Q494R4 210 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 ZNF468Q5VIY5 522 aaPredicted RBP10.43□□□□□ -0.74
RFFL-204ENST00000414419 ZNF324BQ6AW86 544 aaPredicted RBP10.43□□□□□ -0.74
RFFL-204ENST00000414419 MRM1Q6IN84 353 aaKnown RBP10.43□□□□□ -0.74
RFFL-204ENST00000414419 LETMD1Q6P1Q0 360 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 GPRIN3Q6ZVF9 776 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.43□□□□□ -0.74
RFFL-204ENST00000414419 TDRPQ86YL5 185 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 ST13P4Q8IZP2 240 aaPredicted RBP10.43□□□□□ -0.74
RFFL-204ENST00000414419 CYP4Z2PQ8N1L4 340 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 ARMC10Q8N2F6 343 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 CCNYL1Q8N7R7 359 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 CDYL2Q8N8U2 506 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 OR5L2Q8NGL0 311 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 METTL6Q8TCB7 284 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 EPS8L3Q8TE67 593 aaKnown RBP10.43□□□□□ -0.74
RFFL-204ENST00000414419 MZB1Q8WU39 189 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 ASB15Q8WXK1 588 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 TMEM237Q96Q45 408 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 ZNF717Q9BY31 904 aaPredicted RBP10.43□□□□□ -0.74
RFFL-204ENST00000414419 MRPL1Q9BYD6 325 aaKnown RBP10.43□□□□□ -0.74
RFFL-204ENST00000414419 HES7Q9BYE0 225 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 ANKZF1Q9H8Y5 726 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 MYOTQ9UBF9 498 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 SEC14L3Q9UDX4 400 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 ZNF223Q9UK11 482 aaPredicted RBP10.43□□□□□ -0.74
RFFL-204ENST00000414419 ADAM29Q9UKF5 820 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 KLF13Q9Y2Y9 288 aaPredicted RBP10.43□□□□□ -0.74
RFFL-204ENST00000414419 ASB4Q9Y574 426 aa10.43□□□□□ -0.74
RFFL-204ENST00000414419 A0A1B0GTL3 188 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 A0A1W2PR48 441 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 GLOD5A6NK44 160 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 A8MVJ9 347 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 KLRC4-KLRK1H3BQV0 150 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 WWP2O00308 870 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 NME2P1O60361 137 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 PRKRAO75569 313 aaKnown RBP10.42□□□□□ -0.74
RFFL-204ENST00000414419 OR2J2O76002 312 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 UNC5CO95185 931 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 AIFM1O95831 613 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 NME2P22392 152 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 CRHR1P34998 444 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 PKNOX1P55347 436 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 PER3P56645 1201 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 RNF4P78317 190 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 IGLV3-21P80748 117 aaPredicted RBP10.42□□□□□ -0.74
RFFL-204ENST00000414419 IFFO1Q0D2I5 559 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 LCP2Q13094 533 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 CFAP157Q5JU67 520 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 OR52E8Q6IFG1 317 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 METTL4Q8N3J2 472 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 OR8K3Q8NH51 312 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 SREK1Q8WXA9 508 aaKnown RBP10.42□□□□□ -0.74
RFFL-204ENST00000414419 RIT1Q92963 219 aa10.42□□□□□ -0.74
RFFL-204ENST00000414419 PPWD1Q96BP3 646 aaKnown RBP10.42□□□□□ -0.74
RFFL-204ENST00000414419 L3HYPDHQ96EM0 354 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms