RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 COQ5Q5HYK3 327 aa15.95■□□□□ 0.14
SCAMP4-204ENST00000414057 IL23RQ5VWK5 629 aa15.95■□□□□ 0.14
SCAMP4-204ENST00000414057 CYP20A1Q6UW02 462 aa15.95■□□□□ 0.14
SCAMP4-204ENST00000414057 GLB1L3Q8NCI6 653 aaPredicted RBP15.95■□□□□ 0.14
SCAMP4-204ENST00000414057 C10orf90Q96M02 699 aa15.95■□□□□ 0.14
SCAMP4-204ENST00000414057 OR2A5Q96R48 311 aa15.95■□□□□ 0.14
SCAMP4-204ENST00000414057 C1orf50Q9BV19 199 aa15.95■□□□□ 0.14
SCAMP4-204ENST00000414057 YIPF2Q9BWQ6 316 aa15.95■□□□□ 0.14
SCAMP4-204ENST00000414057 LHPPQ9H008 270 aa15.95■□□□□ 0.14
SCAMP4-204ENST00000414057 MMADHCQ9H3L0 296 aaPredicted RBP15.95■□□□□ 0.14
SCAMP4-204ENST00000414057 DMRT3Q9NQL9 472 aa15.95■□□□□ 0.14
SCAMP4-204ENST00000414057 C14orf105Q9NVL8 296 aa15.95■□□□□ 0.14
SCAMP4-204ENST00000414057 CUEDC1Q9NWM3 386 aaPredicted RBP15.95■□□□□ 0.14
SCAMP4-204ENST00000414057 CCDC167Q9P0B6 97 aa15.95■□□□□ 0.14
SCAMP4-204ENST00000414057 TRPC4Q9UBN4 977 aa15.95■□□□□ 0.14
SCAMP4-204ENST00000414057 C3orf18Q9UK00 162 aa15.95■□□□□ 0.14
SCAMP4-204ENST00000414057 MAPRE3Q9UPY8 281 aa15.95■□□□□ 0.14
SCAMP4-204ENST00000414057 RUVBL1Q9Y265 456 aaKnown RBP15.95■□□□□ 0.14
SCAMP4-204ENST00000414057 POLR3HQ9Y535 204 aaPredicted RBP15.95■□□□□ 0.14
SCAMP4-204ENST00000414057 TNRC6AQ8NDV7 1962 aaKnown RBP15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 SPENQ96T58 3664 aaKnown RBP15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 MED13Q9UHV7 2174 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 SETXQ7Z333 2677 aaKnown RBP15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 IGKV1-8A0A0C4DH67 115 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 LOC100653049A0A140TA62 436 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 TRBC2A0A5B9 178 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 ANKDD1BA6NHY2 528 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 MAGEB17A8MXT2 336 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 H7BY64 318 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 SLC22A3O75751 556 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 KRT34O76011 436 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 AGFG2O95081 481 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 HPP00738 406 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 PTX3P26022 381 aaPredicted RBP15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 UQCRFS1P47985 274 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 CSNK1G2P78368 415 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 MXRA7P84157 204 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 SRSF1Q07955 248 aaKnown RBP eCLIP15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 ACSM2AQ08AH3 577 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 CUL3Q13618 768 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 FAM53BQ14153 422 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 GLIPR1L2Q4G1C9 344 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 ACSM2BQ68CK6 577 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 PAOXQ6QHF9 649 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 Q6ZS92 163 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 ARHGAP24Q8N264 748 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 POU5F2Q8N7G0 328 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 OR11G2Q8NGC1 345 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 MMABQ96EY8 250 aaPredicted RBP15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 PRAP1Q96NZ9 151 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 WDR77Q9BQA1 342 aaPredicted RBP15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 EFCAB1Q9HAE3 211 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 MKKSQ9NPJ1 570 aaPredicted RBP15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 TAS2R1Q9NYW7 299 aa15.94■□□□□ 0.14
SCAMP4-204ENST00000414057 SNRNP200O75643 2136 aaKnown RBP15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 FAM234BA2RU67 622 aa15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 SEMA3DO95025 777 aa15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 MED26O95402 600 aa15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 G6PDP11413 515 aa15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 GP1BBP13224 206 aa15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 AVPR1BP47901 424 aa15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 KCNK10P57789 538 aa15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 RPS15AP62244 130 aaKnown RBP15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 RCAN2Q14206 197 aa15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 RBBP5Q15291 538 aaKnown RBP15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 HKDC1Q2TB90 917 aa15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 BLOC1S3Q6QNY0 202 aa15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 SNRNP40Q96DI7 357 aaKnown RBP15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 THOC3Q96J01 351 aaKnown RBP15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 ZBTB18Q99592 522 aa15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 MRPL1Q9BYD6 325 aaKnown RBP15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 SPNS1Q9H2V7 528 aa15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 AGPAT4Q9NRZ5 378 aa15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 AHSPQ9NZD4 102 aa15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 NDUFAF1Q9Y375 327 aa15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 PCSK5Q92824 1860 aa15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 FER1L5A0AVI2 2057 aa15.93■□□□□ 0.14
SCAMP4-204ENST00000414057 RELNP78509 3460 aa15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 MASP2O00187 686 aa15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 CLEC3AO75596 197 aa15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 KRT16P08779 473 aa15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 BCKDHAP12694 445 aa15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 AHRP35869 848 aa15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 CPA2P48052 419 aa15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 CLNS1AP54105 237 aaKnown RBP15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 EMP2P54851 167 aa15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 RPS13P62277 151 aaKnown RBP15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 AP2B1P63010 937 aa15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 MEF2AQ02078 507 aaPredicted RBP15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 ELOAQ14241 798 aaKnown RBP15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 PRR30Q53SZ7 412 aaPredicted RBP15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 VWA2Q5GFL6 755 aa15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 GALNT18Q6P9A2 607 aa15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 IGFL2Q6UWQ7 119 aa15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 C16orf89Q6UX73 402 aa15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 RINLQ6ZS11 566 aa15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 GK5Q6ZS86 529 aa15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 NDUFAF7Q7L592 441 aa15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 FUNDC1Q8IVP5 155 aa15.92■□□□□ 0.14
SCAMP4-204ENST00000414057 TMEM151BQ8IW70 566 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms