RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 SYCP3Q8IZU3 236 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 ZNF444Q8N0Y2 327 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 ELMOD1Q8N336 334 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 SMYD1Q8NB12 490 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 OR13C5Q8NGS8 318 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 C8orf46Q8TAG6 207 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 CHPT1Q8WUD6 406 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 SMPDL3AQ92484 453 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 RFT1Q96AA3 541 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 ATF6BQ99941 703 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 PYGO2Q9BRQ0 406 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 FUT8Q9BYC5 575 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 C3orf14Q9HBI5 128 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 IL1RAPQ9NPH3 570 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 PNPLA3Q9NST1 481 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 ZNF510Q9Y2H8 683 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 CSAG2Q9Y5P2 127 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 MMP24Q9Y5R2 645 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 UMODL1Q5DID0 1318 aa3.09□□□□□ -1.91
HMGB1P11-201ENST00000413899 MED14O60244 1454 aa3.09□□□□□ -1.92
HMGB1P11-201ENST00000413899 PIK3C2AO00443 1686 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 N4BP2Q86UW6 1770 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 MAP2P11137 1827 aaKnown RBP3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 CCDC162PA2VCL2 907 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 SRRM4A7MD48 611 aaKnown RBP3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 ANHXE9PGG2 379 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 K7EQG2 157 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 POP4O95707 220 aaKnown RBP3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 HPRP00739 348 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 IGHV3-13P01766 116 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 CTNNA1P35221 906 aaKnown RBP3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 ETV5P41161 510 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 MAGEB1P43366 347 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 PGFP49763 221 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 TAF6P49848 677 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 CCR4P51679 360 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 SLC8A3P57103 927 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 SRPXP78539 464 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 ACKR1Q16570 336 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 C3AR1Q16581 482 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 RFTN2Q52LD8 501 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 GLRA4Q5JXX5 417 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 TEX35Q5T0J7 233 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 OR4N5Q8IXE1 308 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 ABHD12Q8N2K0 398 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 OR6F1Q8NGZ6 308 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 SSC4DQ8WTU2 575 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 RASL10AQ92737 203 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 ANKRD9Q96BM1 317 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 PANX3Q96QZ0 392 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 ZNF559Q9BR84 538 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 CHCHD5Q9BSY4 110 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 LRRC2Q9BYS8 371 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 ACPTQ9BZG2 426 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 MTIF3Q9H2K0 278 aaKnown RBP3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 CUEDC2Q9H467 287 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 GTSE1Q9NYZ3 720 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 KIF26BQ2KJY2 2108 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 TECPR2O15040 1411 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 ADAMTS13Q76LX8 1427 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 NKTRP30414 1462 aaKnown RBP3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 LRRC7Q96NW7 1537 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 LRRC37A3O60309 1634 aa3.08□□□□□ -1.92
HMGB1P11-201ENST00000413899 TRPM3Q9HCF6 1732 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 IGKV3D-20A0A0C4DH25 116 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 ATP6AP2A0A1C7CYW4 349 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 ZNF263O14978 683 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 TTI1O43156 1089 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 ODC1P11926 461 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 VCLP18206 1134 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 RPL9P32969 192 aaKnown RBP3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 KHKP50053 298 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 MFGE8Q08431 387 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 SLC1A5Q15758 541 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 SLC47A2Q86VL8 602 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 CCDC83Q8IWF9 413 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 NUP93Q8N1F7 819 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 ALKBH3Q96Q83 286 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 DESI2Q9BSY9 194 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 OCR1Q9BZK8 76 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 JPT2Q9H910 190 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 RNPEPL1Q9HAU8 725 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 GNB4Q9HAV0 340 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 S100A14Q9HCY8 104 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 IL1RAPL2Q9NP60 686 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 ZNF319Q9P2F9 582 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 ETV7Q9Y603 341 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 NPC1L1Q9UHC9 1359 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 ATP7BP35670 1465 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 PHRF1Q9P1Y6 1649 aaKnown RBP3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 CAMTA1Q9Y6Y1 1673 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 ABCA3Q99758 1704 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 LTN1O94822 1766 aa3.07□□□□□ -1.92
HMGB1P11-201ENST00000413899 CYSRT1A8MQ03 144 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 CCSO14618 274 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 SYT7O43581 403 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 BRD4O60885 1362 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 CRCPO75575 148 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 IGHG1P01857 330 aa3.06□□□□□ -1.92
HMGB1P11-201ENST00000413899 INSRP06213 1382 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms