RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 OR3A3P47888 321 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 PPT1P50897 306 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 CLDN17P56750 224 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 TGM3Q08188 693 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 PJVKQ0ZLH3 352 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 TAF10Q12962 218 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 TRAF3Q13114 568 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 EXOSC7Q15024 291 aaKnown RBP4.09□□□□□ -1.75
BRCA1-204ENST00000412061 STK11Q15831 433 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 SSX2Q16385 188 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 CAMK4Q16566 473 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 ZNF528Q3MIS6 628 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 ZSCAN25Q6NSZ9 544 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 CENPUQ71F23 418 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 KLHDC1Q8N7A1 406 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 TMEM99Q8N816 258 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 ANKFN1Q8N957 763 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 OR9K2Q8NGE7 335 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 RAB3IL1Q8TBN0 382 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 SLC2A14Q8TDB8 520 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 EMG1Q92979 244 aaKnown RBP4.09□□□□□ -1.75
BRCA1-204ENST00000412061 VOPP1Q96AW1 172 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 SENP5Q96HI0 755 aaPredicted RBP4.09□□□□□ -1.75
BRCA1-204ENST00000412061 HPDLQ96IR7 371 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 SGK494Q96LW2 274 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 TESK2Q96S53 571 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 CCNL2Q96S94 520 aaPredicted RBP4.09□□□□□ -1.75
BRCA1-204ENST00000412061 URM1Q9BTM9 101 aaKnown RBP4.09□□□□□ -1.75
BRCA1-204ENST00000412061 NUSAP1Q9BXS6 441 aaKnown RBP4.09□□□□□ -1.75
BRCA1-204ENST00000412061 GSDMCQ9BYG8 508 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 LRRCC1Q9C099 1032 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 SLC26A1Q9H2B4 701 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 MEAF6Q9HAF1 191 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 TCF7L2Q9NQB0 619 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 AGPAT5Q9NUQ2 364 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 ZNHIT6Q9NWK9 470 aaKnown RBP4.09□□□□□ -1.75
BRCA1-204ENST00000412061 SPHK1Q9NYA1 384 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 UTP6Q9NYH9 597 aaKnown RBP4.09□□□□□ -1.75
BRCA1-204ENST00000412061 SMARCAL1Q9NZC9 954 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 SPATA7Q9P0W8 599 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 LHX3Q9UBR4 397 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 WNT16Q9UBV4 365 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 MRTO4Q9UKD2 239 aaKnown RBP4.09□□□□□ -1.75
BRCA1-204ENST00000412061 PILRAQ9UKJ1 303 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 AMDHD2Q9Y303 409 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 PCDHAC2Q9Y5I4 1007 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 IGLV5-37A0A075B6J1 123 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 ATP6AP2A0A1C7CYW4 349 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 METTL21EPA6NDL7 271 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 PCP4L1A6NKN8 68 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 KIF2AO00139 706 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-204ENST00000412061 ARPC3O15145 178 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 POLR2DO15514 142 aaKnown RBP4.08□□□□□ -1.76
BRCA1-204ENST00000412061 OR1F1O43749 312 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 FCMRO60667 390 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 FLOT1O75955 427 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 NEBLO76041 1014 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 BMP15O95972 392 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 APOHP02749 345 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-204ENST00000412061 CAPN1P07384 714 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 PABPC4LP0CB38 370 aaKnown RBP4.08□□□□□ -1.76
BRCA1-204ENST00000412061 CT45A8P0DMV1 189 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 CT45A9P0DMV2 189 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 SLC2A3P11169 496 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 RALBP11234 206 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 CD59P13987 128 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 GP9P14770 177 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 MYOD1P15172 320 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 PCMT1P22061 227 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 PTBP1P26599 531 aaKnown RBP eCLIP4.08□□□□□ -1.76
BRCA1-204ENST00000412061 GNL1P36915 607 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-204ENST00000412061 MAGEA1P43355 309 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 SYKP43405 635 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 LIMK2P53671 638 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 CARD18P57730 90 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 FGL1Q08830 312 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 NCBP1Q09161 790 aaKnown RBP4.08□□□□□ -1.76
BRCA1-204ENST00000412061 HSPA14Q0VDF9 509 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 ZNF155Q12901 538 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-204ENST00000412061 ZBTB17Q13105 803 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 OPCMLQ14982 345 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 MPPE1Q53F39 396 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 PDLIM3Q53GG5 364 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-204ENST00000412061 CT45A2Q5DJT8 189 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 PRAMEF5Q5TYX0 476 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 PRAMEF6Q5VXH4 476 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 CARD17Q5XLA6 110 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 RTL6Q6ICC9 239 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 PYHIN1Q6K0P9 492 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 CAPN13Q6MZZ7 669 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-204ENST00000412061 TRIM65Q6PJ69 517 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 RHBDF2Q6PJF5 856 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 CORO6Q6QEF8 472 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 C17orf107Q6ZR85 190 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 CYP4V2Q6ZWL3 525 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-204ENST00000412061 TRMT11Q7Z4G4 463 aaKnown RBP4.08□□□□□ -1.76
BRCA1-204ENST00000412061 COX8CQ7Z4L0 72 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 C5orf24Q7Z6I8 188 aa4.08□□□□□ -1.76
BRCA1-204ENST00000412061 CDR2LQ86X02 465 aaPredicted RBP4.08□□□□□ -1.76
BRCA1-204ENST00000412061 ADHFE1Q8IWW8 467 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms