RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 SAMD8Q96LT4 415 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 HSPA12BQ96MM6 686 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 HIST1H2AAQ96QV6 131 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 SNX18Q96RF0 628 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 DOK1Q99704 481 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 GPR174Q9BXC1 333 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 TRIM15Q9C019 465 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 HOXD1Q9GZZ0 328 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 ZDHHC6Q9H6R6 413 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 LRRC19Q9H756 370 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 WDR26Q9H7D7 661 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 SP140LQ9H930 580 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 PDFQ9HBH1 243 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 EPB41L5Q9HCM4 733 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 INTS9Q9NV88 658 aaKnown RBP4.36□□□□□ -1.71
SF3B1-202ENST00000409915 MRPS18AQ9NVS2 196 aaKnown RBP4.36□□□□□ -1.71
SF3B1-202ENST00000409915 STMN3Q9NZ72 180 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 HACD3Q9P035 362 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 KLHL14Q9P2G3 628 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 SAE1Q9UBE0 346 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-202ENST00000409915 PEMTQ9UBM1 199 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 HSPB7Q9UBY9 170 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 SLC23A1Q9UHI7 598 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 NUP50Q9UKX7 468 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 PACSIN2Q9UNF0 486 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-202ENST00000409915 HS3ST2Q9Y278 367 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 ERGIC3Q9Y282 383 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 AP3M1Q9Y2T2 418 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 SLCO1B1Q9Y6L6 691 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 OTOGLQ3ZCN5 2332 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 NYNRINQ9P2P1 1898 aaKnown RBP4.36□□□□□ -1.71
SF3B1-202ENST00000409915 EP300Q09472 2414 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-202ENST00000409915 NUMA1Q14980 2115 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 GVINP1Q7Z2Y8 2422 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 RIF1Q5UIP0 2472 aaKnown RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 PIEZO1Q92508 2521 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 GXYLT2A0PJZ3 443 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 XKRY2A2RUG3 117 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 ARHGAP42A6NI28 874 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 C3orf70A6NLC5 250 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 MEI4A8MW99 385 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 PATE3B3GLJ2 98 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 PROB1E7EW31 1015 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 H0YIV9 168 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 KPNA3O00505 521 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 TO15178 435 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 GSC2O15499 205 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 INSIG1O15503 277 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 PSTPIP1O43586 416 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 KDELR3O43731 214 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 MAGEC1O60732 1142 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 PRAMEF11O60813 436 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 CCDC22O60826 627 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 MITFO75030 526 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 FKBP6O75344 327 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 VPS4BO75351 444 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 ENTPD5O75356 428 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 CDK14O94921 469 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 SNAPINO95295 136 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 MED26O95402 600 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 PIGNO95427 931 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 CLPTM1O96005 669 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 AK1P00568 194 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 PLGP00747 810 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 UGT2B4P06133 528 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 KRT7P08729 469 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 GLI4P10075 376 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 LYL1P12980 280 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 CTPS1P17812 591 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 FSTP19883 344 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 FDXRP22570 491 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 KDELR1P24390 212 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 MGAT1P26572 445 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 GSTM2P28161 218 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 HTR7P34969 479 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 DRD3P35462 400 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 HNF1BP35680 557 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 TAGLN2P37802 199 aaKnown RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 MPLP40238 635 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 GSTM5P46439 218 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 ENTPD1P49961 510 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 NDST2P52849 883 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 SLC18A1P54219 525 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 ADPRHP54922 357 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 MAXP61244 160 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 RHOAP61586 193 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 PPP2CBP62714 309 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 PPP2CAP67775 309 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 MVKQ03426 396 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 FOLH1Q04609 750 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 SLC10A7Q0GE19 358 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 CNTN1Q12860 1018 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 SLC10A2Q12908 348 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 SELENBP1Q13228 472 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 SF3A2Q15428 464 aaKnown RBP4.35□□□□□ -1.71
SF3B1-202ENST00000409915 SGCBQ16585 318 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 PARP15Q460N3 678 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 RALGPS1Q5JS13 557 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 CLVS2Q5SYC1 327 aa4.35□□□□□ -1.71
SF3B1-202ENST00000409915 C6orf163Q5TEZ5 329 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms