RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 C10orf120Q5SQS8 335 aa4□□□□□ -1.77
CLK1-203ENST00000409769 PLEKHS1Q5SXH7 462 aa4□□□□□ -1.77
CLK1-203ENST00000409769 HECTD3Q5T447 861 aa4□□□□□ -1.77
CLK1-203ENST00000409769 STXBP5Q5T5C0 1151 aa4□□□□□ -1.77
CLK1-203ENST00000409769 SEL1L2Q5TEA6 688 aa4□□□□□ -1.77
CLK1-203ENST00000409769 FAM72AQ5TYM5 149 aa4□□□□□ -1.77
CLK1-203ENST00000409769 KIAA0930Q6ICG6 404 aaPredicted RBP4□□□□□ -1.77
CLK1-203ENST00000409769 FAM72DQ6L9T8 149 aa4□□□□□ -1.77
CLK1-203ENST00000409769 SCYL2Q6P3W7 929 aa4□□□□□ -1.77
CLK1-203ENST00000409769 GALNT5Q7Z7M9 940 aa4□□□□□ -1.77
CLK1-203ENST00000409769 FAM72BQ86X60 149 aa4□□□□□ -1.77
CLK1-203ENST00000409769 ARID3BQ8IVW6 561 aaPredicted RBP4□□□□□ -1.77
CLK1-203ENST00000409769 CEP97Q8IW35 865 aa4□□□□□ -1.77
CLK1-203ENST00000409769 ZNF683Q8IZ20 524 aa4□□□□□ -1.77
CLK1-203ENST00000409769 PYROXD2Q8N2H3 581 aa4□□□□□ -1.77
CLK1-203ENST00000409769 ELMOD1Q8N336 334 aa4□□□□□ -1.77
CLK1-203ENST00000409769 PQLC3Q8N755 202 aa4□□□□□ -1.77
CLK1-203ENST00000409769 OR52I2Q8NH67 350 aa4□□□□□ -1.77
CLK1-203ENST00000409769 RNF139Q8WU17 664 aa4□□□□□ -1.77
CLK1-203ENST00000409769 AZIN2Q96A70 460 aa4□□□□□ -1.77
CLK1-203ENST00000409769 TCEAL4Q96EI5 215 aa4□□□□□ -1.77
CLK1-203ENST00000409769 RBM41Q96IZ5 413 aaKnown RBP4□□□□□ -1.77
CLK1-203ENST00000409769 MS4A14Q96JA4 679 aa4□□□□□ -1.77
CLK1-203ENST00000409769 CAPZA3Q96KX2 299 aa4□□□□□ -1.77
CLK1-203ENST00000409769 RNF157Q96PX1 679 aa4□□□□□ -1.77
CLK1-203ENST00000409769 PRMT1Q99873 361 aaKnown RBP4□□□□□ -1.77
CLK1-203ENST00000409769 OSBPL8Q9BZF1 889 aa4□□□□□ -1.77
CLK1-203ENST00000409769 S1PR5Q9H228 398 aa4□□□□□ -1.77
CLK1-203ENST00000409769 ZWILCHQ9H900 591 aa4□□□□□ -1.77
CLK1-203ENST00000409769 STAU2Q9NUL3 570 aaKnown RBP eCLIP4□□□□□ -1.77
CLK1-203ENST00000409769 MARCH4Q9P2E8 410 aaPredicted RBP4□□□□□ -1.77
CLK1-203ENST00000409769 KLHL9Q9P2J3 617 aa4□□□□□ -1.77
CLK1-203ENST00000409769 RCOR3Q9P2K3 495 aaPredicted RBP4□□□□□ -1.77
CLK1-203ENST00000409769 XPO7Q9UIA9 1087 aaKnown RBP4□□□□□ -1.77
CLK1-203ENST00000409769 RASAL2Q9UJF2 1139 aa4□□□□□ -1.77
CLK1-203ENST00000409769 STOML2Q9UJZ1 356 aa4□□□□□ -1.77
CLK1-203ENST00000409769 TCF19Q9Y242 345 aa4□□□□□ -1.77
CLK1-203ENST00000409769 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4□□□□□ -1.77
CLK1-203ENST00000409769 KIAA1549LQ6ZVL6 1849 aa4□□□□□ -1.77
CLK1-203ENST00000409769 SZT2Q5T011 3432 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 COL4A2P08572 1712 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 SYNJ2BP-COX16A0A087WUM0 186 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 TRAV19A0A0A6YYK7 116 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 A0A0G2JNG1 304 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 A0A1W2PPI3 338 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 OR2M5A3KFT3 312 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 SERINC4A6NH21 518 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 PI4K2BG5E9Z4 385 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 CCDC188H7C350 402 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 APOC4-APOC2K7ER74 178 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 EEF2KO00418 725 aaKnown RBP3.99□□□□□ -1.77
CLK1-203ENST00000409769 ZNF197O14709 1029 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 VILLO15195 856 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 DOK2O60496 412 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 CTSVO60911 334 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 KCNK5O95279 499 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 APOEP02649 317 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 APOC2P02655 101 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 SLC2A3P11169 496 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 MBL2P11226 248 aaPredicted RBP3.99□□□□□ -1.77
CLK1-203ENST00000409769 GOT1P17174 413 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 GJA1P17302 382 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 HOXB8P17481 243 aaPredicted RBP3.99□□□□□ -1.77
CLK1-203ENST00000409769 CEBPBP17676 345 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 HADHAP40939 763 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 SSR1P43307 286 aaKnown RBP3.99□□□□□ -1.77
CLK1-203ENST00000409769 NR2C2P49116 596 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 CLNS1AP54105 237 aaKnown RBP3.99□□□□□ -1.77
CLK1-203ENST00000409769 NTHL1P78549 312 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 CKAP4Q07065 602 aaKnown RBP3.99□□□□□ -1.77
CLK1-203ENST00000409769 C2orf54Q08AI8 447 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 KIR2DS3Q14952 304 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 KIR2DS5Q14953 304 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 ZNF77Q15935 545 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 FAM133BQ5BKY9 247 aaKnown RBP3.99□□□□□ -1.77
CLK1-203ENST00000409769 ANKRD20A8PQ5CZ79 823 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 MS4A13Q5J8X5 152 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 SIRPB2Q5JXA9 342 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 NCBP2-AS2Q69YL0 99 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 PLXDC2Q6UX71 529 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 NLRP14Q86W24 1093 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 UNC45BQ8IWX7 931 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 CMTM8Q8IZV2 173 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 MMGT1Q8N4V1 131 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 C1orf52Q8N6N3 182 aaKnown RBP3.99□□□□□ -1.77
CLK1-203ENST00000409769 CEP112Q8N8E3 955 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 ATP6V0D2Q8N8Y2 350 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 PRELID2Q8N945 189 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 KCTD6Q8NC69 237 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 SPATA4Q8NEY3 305 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 SLC24A4Q8NFF2 622 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 ITFG1Q8TB96 612 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 PPP4R1Q8TF05 950 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 SUSD6Q92537 303 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 MRPS31Q92665 395 aaKnown RBP3.99□□□□□ -1.77
CLK1-203ENST00000409769 LINGO1Q96FE5 620 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 RPGRIP1Q96KN7 1286 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 BTN2A3PQ96KV6 586 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 CSPG4P5Q96PW8 444 aa3.99□□□□□ -1.77
CLK1-203ENST00000409769 CYP2S1Q96SQ9 504 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms