RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 PIK3C3Q8NEB9 887 aa19.6■□□□□ 0.73
USP39-203ENST00000409470 SLC38A5Q8WUX1 472 aa19.6■□□□□ 0.73
USP39-203ENST00000409470 ZNF347Q96SE7 839 aa19.6■□□□□ 0.73
USP39-203ENST00000409470 TPSD1Q9BZJ3 242 aa19.6■□□□□ 0.73
USP39-203ENST00000409470 ZSCAN32Q9NX65 697 aa19.6■□□□□ 0.73
USP39-203ENST00000409470 TESMINQ9Y4I5 508 aa19.6■□□□□ 0.73
USP39-203ENST00000409470 PCDHGA8Q9Y5G5 932 aa19.6■□□□□ 0.73
USP39-203ENST00000409470 PRUNE2Q8WUY3 3088 aa19.6■□□□□ 0.73
USP39-203ENST00000409470 A0A0J9YVX5 310 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 CHURC1-FNTBB4DL54 471 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 ADAMDEC1O15204 470 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 ZNF888P0CJ79 500 aaPredicted RBP19.59■□□□□ 0.73
USP39-203ENST00000409470 ITGAMP11215 1152 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 POLR2IP36954 125 aaKnown RBP19.59■□□□□ 0.73
USP39-203ENST00000409470 FZD2Q14332 565 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 RPS26P11Q5JNZ5 115 aaPredicted RBP19.59■□□□□ 0.73
USP39-203ENST00000409470 KDM4DQ6B0I6 523 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 FIGLAQ6QHK4 219 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 FAM160A2Q8N612 972 aaPredicted RBP19.59■□□□□ 0.73
USP39-203ENST00000409470 GEMIN6Q8WXD5 167 aaKnown RBP19.59■□□□□ 0.73
USP39-203ENST00000409470 MAGED4Q96JG8 741 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 SLC35G5Q96KT7 338 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 KLHL25Q9H0H3 589 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 ADNPQ9H2P0 1102 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 LYARQ9NX58 379 aaKnown RBP19.59■□□□□ 0.73
USP39-203ENST00000409470 A0A1W2PPC4 97 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 BCKDKO14874 412 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 VILLO15195 856 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 SLC16A6O15403 523 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 TNFSF14O43557 240 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 ETS2P15036 469 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 ITGA2P17301 1181 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 CDH2P19022 906 aaPredicted RBP19.59■□□□□ 0.73
USP39-203ENST00000409470 EEF1B2P24534 225 aaKnown RBP19.59■□□□□ 0.73
USP39-203ENST00000409470 SMAD2Q15796 467 aaKnown RBP19.59■□□□□ 0.73
USP39-203ENST00000409470 TSEN54Q7Z6J9 526 aaKnown RBP19.59■□□□□ 0.73
USP39-203ENST00000409470 ARMC8Q8IUR7 673 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 NT5CQ8TCD5 201 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 KLHDC7BQ96G42 594 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 TMEM19Q96HH6 336 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 RBM38Q9H0Z9 239 aaKnown RBP19.59■□□□□ 0.73
USP39-203ENST00000409470 SEMA3GQ9NS98 782 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 ZCCHC3Q9NUD5 404 aaKnown RBP19.59■□□□□ 0.73
USP39-203ENST00000409470 SH3GLB1Q9Y371 365 aa19.59■□□□□ 0.73
USP39-203ENST00000409470 KIR2DS5A0A0G2JLQ3 304 aa19.58■□□□□ 0.73
USP39-203ENST00000409470 A0A0G2JNG1 304 aa19.58■□□□□ 0.73
USP39-203ENST00000409470 TMEM247A6NEH6 219 aa19.58■□□□□ 0.73
USP39-203ENST00000409470 TRIM64CA6NLI5 447 aa19.58■□□□□ 0.73
USP39-203ENST00000409470 OR5K4A6NMS3 321 aa19.58■□□□□ 0.73
USP39-203ENST00000409470 KIR2DS3K7RE56 304 aa19.58■□□□□ 0.73
USP39-203ENST00000409470 TNFRSF11BO00300 401 aa19.58■□□□□ 0.73
USP39-203ENST00000409470 HMGN4O00479 90 aa19.58■□□□□ 0.73
USP39-203ENST00000409470 PRAMEF10O60809 474 aa19.58■□□□□ 0.73
USP39-203ENST00000409470 UGT2B11O75310 529 aa19.58■□□□□ 0.73
USP39-203ENST00000409470 NUDT1P36639 197 aa19.58■□□□□ 0.73
USP39-203ENST00000409470 KIR2DS5Q14953 304 aa19.58■□□□□ 0.73
USP39-203ENST00000409470 SLC48A1Q6P1K1 146 aa19.58■□□□□ 0.73
USP39-203ENST00000409470 DGLUCYQ7Z3D6 616 aa19.58■□□□□ 0.73
USP39-203ENST00000409470 SFTPA2Q8IWL1 248 aa19.58■□□□□ 0.73
USP39-203ENST00000409470 CCDC116Q8IYX3 515 aa19.58■□□□□ 0.73
USP39-203ENST00000409470 SLC37A2Q8TED4 501 aa19.58■□□□□ 0.73
USP39-203ENST00000409470 TMIGD2Q96BF3 282 aa19.58■□□□□ 0.73
USP39-203ENST00000409470 ZNF300Q96RE9 604 aaPredicted RBP19.58■□□□□ 0.73
USP39-203ENST00000409470 MAPKAP1Q9BPZ7 522 aa19.58■□□□□ 0.73
USP39-203ENST00000409470 KRT84Q9NSB2 600 aa19.58■□□□□ 0.73
USP39-203ENST00000409470 GIMAP4Q9NUV9 329 aa19.58■□□□□ 0.73
USP39-203ENST00000409470 C2orf74A8MZ97 194 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 PROM1O43490 865 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 CTSVO60911 334 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 ZNF217O75362 1048 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 JRKO75564 520 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 TFPTP0C1Z6 253 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 C8orf89P0DMQ9 161 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 CYP4B1P13584 511 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 IL7RP16871 459 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 FEN1P39748 380 aaKnown RBP19.58■□□□□ 0.72
USP39-203ENST00000409470 HLCSP50747 726 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 ESRRGP62508 458 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 UBE2IP63279 158 aaKnown RBP19.58■□□□□ 0.72
USP39-203ENST00000409470 SPIBQ01892 262 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 IL18R1Q13478 541 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 C1orf61Q13536 156 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 MEP1AQ16819 746 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 ZNF750Q32MQ0 723 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 ZNF691Q5VV52 312 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 FCRL6Q6DN72 434 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 BORAQ6PGQ7 559 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 UTP15Q8TED0 518 aaKnown RBP19.58■□□□□ 0.72
USP39-203ENST00000409470 NMD3Q96D46 503 aaKnown RBP19.58■□□□□ 0.72
USP39-203ENST00000409470 CNRIP1Q96F85 164 aaPredicted RBP19.58■□□□□ 0.72
USP39-203ENST00000409470 SLC6A18Q96N87 628 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 OR2A5Q96R48 311 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 TWSG1Q9GZX9 223 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 THSD1Q9NS62 852 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 TRPC4Q9UBN4 977 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 ENTPD2Q9Y5L3 495 aa19.58■□□□□ 0.72
USP39-203ENST00000409470 ALPPL2P10696 532 aa19.57■□□□□ 0.72
USP39-203ENST00000409470 PTGER1P34995 402 aa19.57■□□□□ 0.72
USP39-203ENST00000409470 PRKAG1P54619 331 aa19.57■□□□□ 0.72
USP39-203ENST00000409470 SIM2Q14190 667 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms