RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 CACNA1CQ13936 2221 aa17.89■□□□□ 0.46
SMARCB1-204ENST00000407422 HRKO00198 91 aa17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 TFECO14948 347 aaPredicted RBP17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 TMPRSS11DO60235 418 aa17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 HS6ST1O60243 411 aa17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 CLDN9O95484 217 aa17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 RBP1P09455 135 aa17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 ABOP16442 354 aa17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 STT3AP46977 705 aa17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 SERPINB9P50453 376 aa17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 TNFRSF17Q02223 184 aa17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 FOLH1Q04609 750 aa17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 METTL2BQ6P1Q9 378 aaKnown RBP17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 MTFR2Q6P444 385 aa17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 NCCRP1Q6ZVX7 275 aaPredicted RBP17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 POGLUT1Q8NBL1 392 aa17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 PSD4Q8NDX1 1056 aa17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 DOK4Q8TEW6 326 aa17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 MTFMTQ96DP5 389 aaKnown RBP17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 ZBTB26Q9HCK0 441 aa17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 TIMMDC1Q9NPL8 285 aa17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 MS4A12Q9NXJ0 267 aa17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 ENTPD4Q9Y227 616 aa17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 ASB4Q9Y574 426 aa17.89■□□□□ 0.45
SMARCB1-204ENST00000407422 A0A0A6YYD5 115 aa17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 ARHGAP10A1A4S6 786 aa17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 GLOD5A6NK44 160 aa17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 TRIM49D1C9J1S8 452 aa17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 PROM1O43490 865 aa17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 KRT38O76015 456 aa17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 TUBB4AP04350 444 aa17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 ESRRAP11474 423 aaPredicted RBP17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 ARL1P40616 181 aaPredicted RBP17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 NR0B1P51843 470 aaKnown RBP17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 ART3Q13508 389 aa17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 CUL3Q13618 768 aa17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 MRM1Q6IN84 353 aaKnown RBP17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 C3P1Q6ZMU1 363 aa17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 RPS27LQ71UM5 84 aaKnown RBP17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 ZNF808Q8N4W9 903 aaPredicted RBP17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 ZFP62Q8NB50 900 aaPredicted RBP17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 C16orf52Q8NHV5 167 aa17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 UCN3Q969E3 161 aa17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 SENP5Q96HI0 755 aaPredicted RBP17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 DGAT2Q96PD7 388 aa17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 PHF12Q96QT6 1004 aa17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 PHF11Q9UIL8 331 aa17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 PCTPQ9UKL6 214 aa17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 FBN2P35556 2912 aa17.88■□□□□ 0.45
SMARCB1-204ENST00000407422 A0A0G2JMM0 328 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 A0A1W2PPB8 328 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 A0A1W2PR48 441 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 A0A1W2PRS3 328 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 PINLYPA6NC86 204 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 KIR3DP1A8MWS1 328 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 GBAP04062 536 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 CCNG1P51959 295 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 ARFIP1P53367 373 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 PHEXP78562 749 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 ZNF750Q32MQ0 723 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 CMPK2Q5EBM0 449 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 RPTNQ6XPR3 784 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 TAOK1Q7L7X3 1001 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 DOLPP1Q86YN1 238 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 SLC34A3Q8N130 599 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 OR8K3Q8NH51 312 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 AGAP11Q8TF27 550 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 TANKQ92844 425 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 ATP6V1E2Q96A05 226 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 DDX31Q9H8H2 851 aaKnown RBP17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 COPS7AQ9UBW8 275 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 ZNF180Q9UJW8 692 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 NFU1Q9UMS0 254 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 MEMO1Q9Y316 297 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 TACC2O95359 2948 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 CSMD2Q7Z408 3487 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 A0A087WUV0 522 aaPredicted RBP17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 A0A1B0GTH9 108 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 A0A1B0GTL3 188 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 G3V3Y1 287 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 STX16-NPEPL1H3BU86 382 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 FOXE1O00358 373 aaPredicted RBP17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 STX16O14662 325 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 IGKV3-11P04433 115 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 SBK3P0C264 359 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 FAM58BPP0C7Q3 252 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 COX7A2P14406 83 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 TLX1P31314 330 aaPredicted RBP17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 TRAF3Q13114 568 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 CDSNQ15517 529 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 TSNAXIP1Q2TAA8 658 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 GPALPP1Q8IXQ4 340 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 OR52N2Q8NGI0 321 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 MARVELD3Q96A59 401 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 RBM18Q96H35 190 aaKnown RBP17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 SEMA4BQ9NPR2 832 aaPredicted RBP17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 PSD3Q9NYI0 1048 aa17.87■□□□□ 0.45
SMARCB1-204ENST00000407422 CDC40O60508 579 aaKnown RBP eCLIP17.86■□□□□ 0.45
SMARCB1-204ENST00000407422 SMIM24O75264 130 aa17.86■□□□□ 0.45
SMARCB1-204ENST00000407422 PDE9AO76083 593 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms