RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 CLK1P49759 484 aaKnown RBP3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 NDST2P52849 883 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 POLR2FP61218 127 aaKnown RBP3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 MFGE8Q08431 387 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 CALCOCO2Q13137 446 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 KIAA0141Q14154 515 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 BTG3Q14201 252 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 MEF2DQ14814 521 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 P2RY14Q15391 338 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 MLF2Q15773 248 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 MOGAT2Q3SYC2 334 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 C14orf177Q52M58 125 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 MPPE1Q53F39 396 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 CDC42EP5Q6NZY7 148 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 GDPGP1Q6ZNW5 385 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 Q6ZTC4 211 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 TMEM26Q6ZUK4 368 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 HDDC3Q8N4P3 179 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 LEMD2Q8NC56 503 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 C8orf46Q8TAG6 207 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 TMEM186Q96B77 213 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 TBC1D31Q96DN5 1066 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 C18orf12Q96KH6 178 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 SAMD8Q96LT4 415 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 DEFB118Q96PH6 123 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 BARHL1Q9BZE3 327 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 UPF3AQ9H1J1 476 aaKnown RBP3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 LIME1Q9H400 295 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 BARHL2Q9NY43 387 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 THAP10Q9P2Z0 257 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 ASIC3Q9UHC3 531 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 IL20RAQ9UHF4 553 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 TEKT2Q9UIF3 430 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 WIPI2Q9Y4P8 454 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 CLCA3PQ9Y6N3 262 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 UMODL1Q5DID0 1318 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 IGLV7-46A0A075B6I9 117 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 IGHV3-38A0A0C4DH36 116 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 MPTX1A8MV57 137 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 NEDD8-MDP1E9PL57 170 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 INPP4BO15327 924 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 TNFSF12O43508 249 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 PDGFBP01127 241 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 CXCL10P02778 98 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 FHP07954 510 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 GNSP15586 552 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 PTPN4P29074 926 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 CHRNA3P32297 505 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 ACADSBP45954 432 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 SLC26A5P58743 744 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 RPS4XP62701 263 aaKnown RBP3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 CCZ1BP86790 482 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 CCZ1P86791 482 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 CYCSP99999 105 aaKnown RBP3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 SLC17A1Q14916 467 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 ZKSCAN8Q15776 578 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 TOR1AIP1Q5JTV8 583 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 TCHHL1Q5QJ38 904 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 STEAP1BQ6NZ63 245 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 KDM8Q8N371 416 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 MRPL43Q8N983 215 aaKnown RBP3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 Q8NBF4 154 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 HCAR2Q8TDS4 363 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 MRPL38Q96DV4 380 aaKnown RBP3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 RAB3CQ96E17 227 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 NSMCE3Q96MG7 304 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 SPAG8Q99932 426 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 PINK1Q9BXM7 581 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 TRPV6Q9H1D0 765 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 WDR41Q9HAD4 459 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 NGBQ9NPG2 151 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 TXLNGQ9NUQ3 528 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 NUDT4Q9NZJ9 180 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 HOOK1Q9UJC3 728 aaKnown RBP3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 CCPG1Q9ULG6 757 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 KLHDC2Q9Y2U9 406 aa3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 KLF2Q9Y5W3 355 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P17-201ENST00000403495 RGSL1A5PLK6 1076 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 ZNF724A8MTY0 619 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 SH2D1BO14796 132 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 IDH3BO43837 385 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 DUSP11O75319 330 aaKnown RBP3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 ADORA3P0DMS8 318 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 FUT1P19526 365 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 HILS1P60008 231 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 GMFBP60983 142 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 ABCE1P61221 599 aaKnown RBP3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 HSPA14Q0VDF9 509 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 KLF5Q13887 457 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 GAMTQ14353 236 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 CLPPQ16740 277 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 ECSCRQ19T08 205 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 MTHFSDQ2M296 383 aaKnown RBP3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 AGKQ53H12 422 aa3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 FASTKD1Q53R41 847 aaKnown RBP3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 DNAJC21Q5F1R6 531 aaKnown RBP3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 HERC4Q5GLZ8 1057 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 OTUD3Q5T2D3 398 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P17-201ENST00000403495 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms