RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 FOXJ1Q92949 421 aa18.89■□□□□ 0.61
CCDC47-202ENST00000403162 WRAP53Q9BUR4 548 aaKnown RBP18.89■□□□□ 0.61
CCDC47-202ENST00000403162 MYNNQ9NPC7 610 aa18.89■□□□□ 0.61
CCDC47-202ENST00000403162 SPATA7Q9P0W8 599 aa18.89■□□□□ 0.61
CCDC47-202ENST00000403162 NDOR1Q9UHB4 597 aa18.89■□□□□ 0.61
CCDC47-202ENST00000403162 N6AMT1Q9Y5N5 214 aa18.89■□□□□ 0.61
CCDC47-202ENST00000403162 V9GYH0 126 aa18.89■□□□□ 0.61
CCDC47-202ENST00000403162 TSPAN6O43657 245 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 KRT75O95678 551 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 RPS19P39019 145 aaKnown RBP18.88■□□□□ 0.61
CCDC47-202ENST00000403162 TMEM201Q5SNT2 666 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 FAM71E1Q6IPT2 247 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 FAM92BQ6ZTR7 304 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 ARMCX6Q7L4S7 300 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 HSD11B1LQ7Z5J1 315 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 NRARPQ7Z6K4 114 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 TMPRSS11BQ86T26 416 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 LAS2Q8IYD9 372 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 FGF13Q92913 245 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 WDFY2Q96P53 400 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 GAS2L1Q99501 681 aaPredicted RBP18.88■□□□□ 0.61
CCDC47-202ENST00000403162 CNPPD1Q9BV87 410 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 BARHL1Q9BZE3 327 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 TRIM39Q9HCM9 518 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 SZT2Q5T011 3432 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 SLC5A10A0PJK1 596 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 SLC35F4A4IF30 521 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 ADAP00813 363 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 POU3F3P20264 500 aaPredicted RBP18.88■□□□□ 0.61
CCDC47-202ENST00000403162 HLA-FP30511 346 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 VIPR1P32241 457 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 PREPP48147 710 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 MC1RQ01726 317 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 ATAT1Q5SQI0 421 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 PRPF38BQ5VTL8 546 aaKnown RBP18.88■□□□□ 0.61
CCDC47-202ENST00000403162 GDPD4Q6W3E5 623 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 TRIM69Q86WT6 500 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 TAGAPQ8N103 731 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 TRAM1L1Q8N609 369 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 OR5AK3PQ8NH89 298 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 C16orf78Q8WTQ4 265 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 ASB15Q8WXK1 588 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 MTERF3Q96E29 417 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 WDR34Q96EX3 536 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 SEC14L4Q9UDX3 406 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 SLC25A13Q9UJS0 675 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 RAB23Q9ULC3 237 aa18.88■□□□□ 0.61
CCDC47-202ENST00000403162 ENTPD6O75354 484 aa18.87■□□□□ 0.61
CCDC47-202ENST00000403162 CYP2A6P11509 494 aaPredicted RBP18.87■□□□□ 0.61
CCDC47-202ENST00000403162 C2orf80Q0P641 193 aa18.87■□□□□ 0.61
CCDC47-202ENST00000403162 ZNF648Q5T619 568 aaPredicted RBP18.87■□□□□ 0.61
CCDC47-202ENST00000403162 C6orf183Q5T699 404 aa18.87■□□□□ 0.61
CCDC47-202ENST00000403162 HENMT1Q5T8I9 393 aaKnown RBP18.87■□□□□ 0.61
CCDC47-202ENST00000403162 NXNL2Q5VZ03 156 aa18.87■□□□□ 0.61
CCDC47-202ENST00000403162 UNC5DQ6UXZ4 953 aa18.87■□□□□ 0.61
CCDC47-202ENST00000403162 ZNF517Q6ZMY9 492 aaPredicted RBP18.87■□□□□ 0.61
CCDC47-202ENST00000403162 CHST14Q8NCH0 376 aa18.87■□□□□ 0.61
CCDC47-202ENST00000403162 KLHL6Q8WZ60 621 aa18.87■□□□□ 0.61
CCDC47-202ENST00000403162 S1PR5Q9H228 398 aa18.87■□□□□ 0.61
CCDC47-202ENST00000403162 DMRT3Q9NQL9 472 aa18.87■□□□□ 0.61
CCDC47-202ENST00000403162 NFKBIL1Q9UBC1 381 aaPredicted RBP18.87■□□□□ 0.61
CCDC47-202ENST00000403162 TLR4O00206 839 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 RORCP51449 518 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 NCF4Q15080 339 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 THOC7Q6I9Y2 204 aaKnown RBP18.86■□□□□ 0.61
CCDC47-202ENST00000403162 BRAT1Q6PJG6 821 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 Q6ZVL8 140 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 LILRA3Q8N6C8 439 aaPredicted RBP18.86■□□□□ 0.61
CCDC47-202ENST00000403162 APOBEC4Q8WW27 367 aaKnown RBP18.86■□□□□ 0.61
CCDC47-202ENST00000403162 ZSCAN5AQ9BUG6 496 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 EXOSC4Q9NPD3 245 aaKnown RBP18.86■□□□□ 0.61
CCDC47-202ENST00000403162 GULP1Q9UBP9 304 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 REV1Q9UBZ9 1251 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 NOX1Q9Y5S8 564 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 ZNF670-ZNF695F2Z2N8 137 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 ATG13O75143 517 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 GBAP04062 536 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 OSMP13725 252 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 POU1F1P28069 291 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 DDOSTP39656 456 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 CRYBB2P43320 205 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 RFX2P48378 723 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 PRLHRP49683 370 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 CTSCP53634 463 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 ILKQ13418 452 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 ZNF77Q15935 545 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 RNLSQ5VYX0 342 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 TMPRSS11AQ6ZMR5 421 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 WDR48Q8TAF3 677 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 TMEM80Q96HE8 168 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 FOPNLQ96NB1 174 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 EFCAB11Q9BUY7 163 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 TMEM121BQ9BXQ6 578 aaPredicted RBP18.86■□□□□ 0.61
CCDC47-202ENST00000403162 RHCGQ9UBD6 479 aa18.86■□□□□ 0.61
CCDC47-202ENST00000403162 A0A1W2PRB8 838 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 WASH3PC4AMC7 463 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 FFAR1O14842 300 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 RGS5O15539 181 aa18.85■□□□□ 0.61
CCDC47-202ENST00000403162 CSO75390 466 aaKnown RBP18.85■□□□□ 0.61
CCDC47-202ENST00000403162 KLHL18O94889 574 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms