RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 ZNF840PA6NDX5 716 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 K7ERQ8 282 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 TLX2O43763 284 aaPredicted RBP16.29■□□□□ 0.2
PTPRA-205ENST00000399903 PRAMEF11O60813 436 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 HOXB6P17509 224 aaKnown RBP16.29■□□□□ 0.2
PTPRA-205ENST00000399903 GABRB1P18505 474 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 RPIAP49247 311 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 CRISP1P54107 249 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 RPS25P62851 125 aaKnown RBP16.29■□□□□ 0.2
PTPRA-205ENST00000399903 TLE2Q04725 743 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 ZSWIM7Q19AV6 140 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 ATXN7L2Q5T6C5 722 aaPredicted RBP16.29■□□□□ 0.2
PTPRA-205ENST00000399903 RNF219Q5W0B1 726 aaPredicted RBP16.29■□□□□ 0.2
PTPRA-205ENST00000399903 ZNF852Q6ZMS4 543 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 TESCQ96BS2 214 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 PPIEQ9UNP9 301 aaKnown RBP16.29■□□□□ 0.2
PTPRA-205ENST00000399903 WASH4PA8MWX3 477 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 NAGAP17050 411 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 GSTM5P46439 218 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 VEGFBP49765 207 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 NCF4Q15080 339 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 TXNDC8Q6A555 127 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 TSEN54Q7Z6J9 526 aaKnown RBP16.29■□□□□ 0.2
PTPRA-205ENST00000399903 LAPTM4BQ86VI4 370 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 MEX3DQ86XN8 651 aaKnown RBP16.29■□□□□ 0.2
PTPRA-205ENST00000399903 KIF18BQ86Y91 864 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 OR4A15Q8NGL6 344 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 DUSP26Q9BV47 211 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 TMED9Q9BVK6 235 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 TMEM245Q9H330 911 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 STOML2Q9UJZ1 356 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 SLC22A14Q9Y267 594 aa16.29■□□□□ 0.2
PTPRA-205ENST00000399903 HYKKA2RU49 373 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 ANKRD66B4E2M5 251 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 RHOCP08134 193 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 ZNF7P17097 686 aaPredicted RBP16.28■□□□□ 0.2
PTPRA-205ENST00000399903 DGKAP23743 735 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 MAPK1P28482 360 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 ADGRD2Q7Z7M1 963 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 LUZP2Q86TE4 346 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 ADGRG2Q8IZP9 1017 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 TRAF4Q9BUZ4 470 aaPredicted RBP16.28■□□□□ 0.2
PTPRA-205ENST00000399903 MND1Q9BWT6 205 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 TAPBPLQ9BX59 468 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 CRLS1Q9UJA2 301 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 FCF1Q9Y324 198 aaKnown RBP16.28■□□□□ 0.2
PTPRA-205ENST00000399903 DRGXA6NNA5 263 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 PRRG1O14668 218 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 ANXA5P08758 320 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 MSL3P1P0C860 447 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 GPX2P18283 190 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 DCDC1P59894 354 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 SELENOWP63302 87 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 INSL4Q14641 139 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 HECTD3Q5T447 861 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 TBC1D20Q96BZ9 403 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 NMNAT1Q9HAN9 279 aaPredicted RBP16.28■□□□□ 0.2
PTPRA-205ENST00000399903 SLC28A3Q9HAS3 691 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 MCCC2Q9HCC0 563 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 SLAMF7Q9NQ25 335 aa16.28■□□□□ 0.2
PTPRA-205ENST00000399903 STC2O76061 302 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 EPOP01588 193 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 HTR7P34969 479 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 LIMK1P53667 647 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 ACSM2AQ08AH3 577 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 GAB1Q13480 694 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 ACSM2BQ68CK6 577 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 FAM46DQ8NEK8 389 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 DNAJB8Q8NHS0 232 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 MS4A7Q9GZW8 240 aaPredicted RBP16.27■□□□□ 0.2
PTPRA-205ENST00000399903 SMG9Q9H0W8 520 aaKnown RBP16.27■□□□□ 0.2
PTPRA-205ENST00000399903 ERVMER34-1Q9H9K5 563 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 SZT2Q5T011 3432 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 IQCMA0A1B0GVH7 501 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 AKAP8O43823 692 aaKnown RBP16.27■□□□□ 0.2
PTPRA-205ENST00000399903 LHCGRP22888 699 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 ZNF91Q05481 1191 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 GPR68Q15743 365 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 AANATQ16613 207 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 ATP13A5Q4VNC0 1218 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 ARL14EPQ8N8R7 260 aaPredicted RBP16.27■□□□□ 0.2
PTPRA-205ENST00000399903 WFDC5Q8TCV5 224 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 PXYLP1Q8TE99 480 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 BTN2A2Q8WVV5 523 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 CTPS2Q9NRF8 586 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 NKIRAS2Q9NYR9 191 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 PCDHB11Q9Y5F2 797 aa16.27■□□□□ 0.2
PTPRA-205ENST00000399903 A0A0A6YYJ9 748 aa16.27■□□□□ 0.19
PTPRA-205ENST00000399903 IGLV3-27P01718 113 aa16.27■□□□□ 0.19
PTPRA-205ENST00000399903 PRPS1L1P21108 318 aa16.27■□□□□ 0.19
PTPRA-205ENST00000399903 SLC11A2P49281 568 aa16.27■□□□□ 0.19
PTPRA-205ENST00000399903 EPHA5P54756 1037 aa16.27■□□□□ 0.19
PTPRA-205ENST00000399903 RBBP4Q09028 425 aa16.27■□□□□ 0.19
PTPRA-205ENST00000399903 RGNQ15493 299 aa16.27■□□□□ 0.19
PTPRA-205ENST00000399903 MPPE1Q53F39 396 aa16.27■□□□□ 0.19
PTPRA-205ENST00000399903 CPTPQ5TA50 214 aa16.27■□□□□ 0.19
PTPRA-205ENST00000399903 BRAT1Q6PJG6 821 aa16.27■□□□□ 0.19
PTPRA-205ENST00000399903 USP45Q70EL2 814 aa16.27■□□□□ 0.19
PTPRA-205ENST00000399903 KATNB1Q9BVA0 655 aa16.27■□□□□ 0.19
PTPRA-205ENST00000399903 NUDT15Q9NV35 164 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms