RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 PRKNO60260 465 aaPredicted RBP12.46□□□□□ -0.41
VCX3A-202ENST00000398729 OR2J2O76002 312 aa12.46□□□□□ -0.41
VCX3A-202ENST00000398729 BUD31P41223 144 aaPredicted RBP12.46□□□□□ -0.41
VCX3A-202ENST00000398729 CCNG1P51959 295 aa12.46□□□□□ -0.41
VCX3A-202ENST00000398729 BIKQ13323 160 aa12.46□□□□□ -0.41
VCX3A-202ENST00000398729 CUL3Q13618 768 aa12.46□□□□□ -0.41
VCX3A-202ENST00000398729 LGSNQ5TDP6 509 aa12.46□□□□□ -0.41
VCX3A-202ENST00000398729 SIAH3Q8IW03 269 aa12.46□□□□□ -0.41
VCX3A-202ENST00000398729 SULF2Q8IWU5 870 aa12.46□□□□□ -0.41
VCX3A-202ENST00000398729 IFT20Q8IY31 132 aa12.46□□□□□ -0.41
VCX3A-202ENST00000398729 GHDCQ8N2G8 530 aa12.46□□□□□ -0.41
VCX3A-202ENST00000398729 OR8K3Q8NH51 312 aa12.46□□□□□ -0.41
VCX3A-202ENST00000398729 WDR20Q8TBZ3 569 aa12.46□□□□□ -0.41
VCX3A-202ENST00000398729 SLC2A12Q8TD20 617 aa12.46□□□□□ -0.41
VCX3A-202ENST00000398729 DCAKDQ8WVC6 231 aa12.46□□□□□ -0.41
VCX3A-202ENST00000398729 ASB15Q8WXK1 588 aa12.46□□□□□ -0.41
VCX3A-202ENST00000398729 TANKQ92844 425 aa12.46□□□□□ -0.41
VCX3A-202ENST00000398729 DGAT2Q96PD7 388 aa12.46□□□□□ -0.41
VCX3A-202ENST00000398729 RPF2Q9H7B2 306 aaKnown RBP12.46□□□□□ -0.41
VCX3A-202ENST00000398729 NOL11Q9H8H0 719 aaKnown RBP12.46□□□□□ -0.41
VCX3A-202ENST00000398729 LIN28AQ9H9Z2 209 aaKnown RBP12.46□□□□□ -0.41
VCX3A-202ENST00000398729 TIMMDC1Q9NPL8 285 aa12.46□□□□□ -0.41
VCX3A-202ENST00000398729 HPF1Q9NWY4 346 aa12.46□□□□□ -0.41
VCX3A-202ENST00000398729 PSD3Q9NYI0 1048 aa12.46□□□□□ -0.41
VCX3A-202ENST00000398729 COPS7AQ9UBW8 275 aa12.46□□□□□ -0.41
VCX3A-202ENST00000398729 NFU1Q9UMS0 254 aa12.46□□□□□ -0.41
VCX3A-202ENST00000398729 SPG11Q96JI7 2443 aa12.46□□□□□ -0.42
VCX3A-202ENST00000398729 EXOC1LA0A1B0GW35 172 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 TMEM200CA6NKL6 621 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 WWP2O00308 870 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 FOXE1O00358 373 aaPredicted RBP12.45□□□□□ -0.42
VCX3A-202ENST00000398729 OR7A17O14581 309 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 FGF17O60258 216 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 SNRPAP09012 282 aaKnown RBP12.45□□□□□ -0.42
VCX3A-202ENST00000398729 ESRRAP11474 423 aaPredicted RBP12.45□□□□□ -0.42
VCX3A-202ENST00000398729 ABOP16442 354 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 MEOX1P50221 254 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 NEK2P51955 445 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 HNRNPH2P55795 449 aaKnown RBP12.45□□□□□ -0.42
VCX3A-202ENST00000398729 IGLV3-21P80748 117 aaPredicted RBP12.45□□□□□ -0.42
VCX3A-202ENST00000398729 PLIN5Q00G26 463 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 TNFRSF17Q02223 184 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 RNFT1Q5M7Z0 435 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 CYP20A1Q6UW02 462 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 C16orf47Q6ZP98 133 aaPredicted RBP12.45□□□□□ -0.42
VCX3A-202ENST00000398729 Q6ZPB1 254 aaPredicted RBP12.45□□□□□ -0.42
VCX3A-202ENST00000398729 SPPL2CQ8IUH8 684 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 OR4N5Q8IXE1 308 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 OR52B6Q8NGF0 335 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 OR5L2Q8NGL0 311 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 RBM18Q96H35 190 aaKnown RBP12.45□□□□□ -0.42
VCX3A-202ENST00000398729 CCDC120Q96HB5 630 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 LURAP1Q96LR2 239 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 CDK15Q96Q40 435 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 RASL10BQ96S79 203 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 SERPINI1Q99574 410 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 MRPL57Q9BQC6 102 aaKnown RBP12.45□□□□□ -0.42
VCX3A-202ENST00000398729 NTMT1Q9BV86 223 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 MRPL46Q9H2W6 279 aaKnown RBP12.45□□□□□ -0.42
VCX3A-202ENST00000398729 DDX31Q9H8H2 851 aaKnown RBP12.45□□□□□ -0.42
VCX3A-202ENST00000398729 LYARQ9NX58 379 aaKnown RBP12.45□□□□□ -0.42
VCX3A-202ENST00000398729 PCTPQ9UKL6 214 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 PPT2Q9UMR5 302 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 ZNF835Q9Y2P0 537 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 ATG4BQ9Y4P1 393 aa12.45□□□□□ -0.42
VCX3A-202ENST00000398729 A0A0A6YYD5 115 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 TFECO14948 347 aaPredicted RBP12.44□□□□□ -0.42
VCX3A-202ENST00000398729 PROM1O43490 865 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 PEX1O43933 1283 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 EEDO75530 441 aaKnown RBP12.44□□□□□ -0.42
VCX3A-202ENST00000398729 SEMA3DO95025 777 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 ETHE1O95571 254 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 ABHD2P08910 425 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 FAM58BPP0C7Q3 252 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 BSGP35613 385 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 STT3AP46977 705 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 HK2P52789 917 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 GPR85P60893 370 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 RNF4P78317 190 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 FOLH1Q04609 750 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 IFT88Q13099 833 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 ART3Q13508 389 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 C3AR1Q16581 482 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 C10orf62Q5T681 223 aaPredicted RBP12.44□□□□□ -0.42
VCX3A-202ENST00000398729 C18orf63Q68DL7 685 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 TTC19Q6DKK2 380 aaPredicted RBP12.44□□□□□ -0.42
VCX3A-202ENST00000398729 MRM1Q6IN84 353 aaKnown RBP12.44□□□□□ -0.42
VCX3A-202ENST00000398729 IL20RBQ6UXL0 311 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 RPTNQ6XPR3 784 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 TRMT10CQ7L0Y3 403 aaKnown RBP12.44□□□□□ -0.42
VCX3A-202ENST00000398729 MDGA2Q7Z553 956 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 NUDT13Q86X67 352 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 ZNF321PQ8N8H1 164 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 PSD4Q8NDX1 1056 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 ZNF721Q8TF20 911 aa12.44□□□□□ -0.42
VCX3A-202ENST00000398729 ITLN2Q8WWU7 325 aaPredicted RBP12.44□□□□□ -0.42
VCX3A-202ENST00000398729 MTFMTQ96DP5 389 aaKnown RBP12.44□□□□□ -0.42
VCX3A-202ENST00000398729 TRIM44Q96DX7 344 aaPredicted RBP12.44□□□□□ -0.42
VCX3A-202ENST00000398729 SENP5Q96HI0 755 aaPredicted RBP12.44□□□□□ -0.42
VCX3A-202ENST00000398729 ART5Q96L15 291 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms