RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 SYT15Q9BQS2 421 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 DCTN5Q9BTE1 182 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 FTHL17Q9BXU8 183 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 FGFBP2Q9BYJ0 223 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 XPO4Q9C0E2 1151 aaKnown RBP2.29□□□□□ -2.04
CD47-203ENST00000398258 WWP1Q9H0M0 922 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 C1orf21Q9H246 121 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 SLC26A1Q9H2B4 701 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 DCLRE1BQ9H816 532 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 MED17Q9NVC6 651 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 ODF2LQ9ULJ1 636 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 EXOGQ9Y2C4 368 aaKnown RBP2.29□□□□□ -2.04
CD47-203ENST00000398258 RNF215Q9Y6U7 377 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 ZHX2Q9Y6X8 837 aa2.29□□□□□ -2.04
CD47-203ENST00000398258 RAD54L2Q9Y4B4 1467 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 ZMYM6O95789 1325 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 IGHV4-30-2A0A087WSY4 118 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 SYCE3A1L190 88 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 CFAP73A6NFT4 308 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 KPNA7A9QM74 516 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 EPM2AB3EWF7 344 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 INPP4BO15327 924 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 ARHGEF9O43307 516 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 TSPAN2O60636 221 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 PDGFBP01127 241 aaPredicted RBP2.28□□□□□ -2.04
CD47-203ENST00000398258 SLC4A1P02730 911 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 RPLP0P05388 317 aaKnown RBP2.28□□□□□ -2.04
CD47-203ENST00000398258 FHP07954 510 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 RNF224P0DH78 156 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 CCNA2P20248 432 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 MAPK3P27361 379 aaPredicted RBP2.28□□□□□ -2.04
CD47-203ENST00000398258 PDHA2P29803 388 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 PKLRP30613 574 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 FCGR2BP31994 310 aaPredicted RBP2.28□□□□□ -2.04
CD47-203ENST00000398258 FCGR2CP31995 323 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 CD86P42081 329 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 SLC6A8P48029 635 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 PITPNBP48739 271 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 CCL11P51671 97 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 DHODHQ02127 395 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 PPP1R8Q12972 351 aaKnown RBP2.28□□□□□ -2.04
CD47-203ENST00000398258 CALCOCO2Q13137 446 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 NFATC2Q13469 925 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 EXOSC7Q15024 291 aaKnown RBP2.28□□□□□ -2.04
CD47-203ENST00000398258 MLF2Q15773 248 aaPredicted RBP2.28□□□□□ -2.04
CD47-203ENST00000398258 MOGAT2Q3SYC2 334 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 FAM182AQ5T1J6 154 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 ZC2HC1BQ5TFG8 222 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 HIST2H2AA3Q6FI13 130 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 RHBDD2Q6NTF9 364 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 FAAP20Q6NZ36 180 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 LCLAT1Q6UWP7 414 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 FAM159AQ6UWV7 190 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 TAF8Q7Z7C8 310 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 WDR49Q8IV35 697 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 KDM8Q8N371 416 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 COLGALT1Q8NBJ5 622 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 RPLP0P6Q8NHW5 317 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 SPPL2AQ8TCT8 520 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 LIPHQ8WWY8 451 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 PNPLA2Q96AD5 504 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 ESAMQ96AP7 390 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 MOCOSQ96EN8 888 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 POM121L2Q96KW2 1035 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 FAM111AQ96PZ2 611 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 ALKBH3Q96Q83 286 aaPredicted RBP2.28□□□□□ -2.04
CD47-203ENST00000398258 TAAR6Q96RI8 345 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 KCNK16Q96T55 309 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 JPH2Q9BR39 696 aaPredicted RBP2.28□□□□□ -2.04
CD47-203ENST00000398258 CBWD1Q9BRT8 395 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 DDX47Q9H0S4 455 aaKnown RBP2.28□□□□□ -2.04
CD47-203ENST00000398258 ATG10Q9H0Y0 220 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 NMUR1Q9HB89 426 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 GPN1Q9HCN4 374 aaPredicted RBP2.28□□□□□ -2.04
CD47-203ENST00000398258 IL1RAPQ9NPH3 570 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 HOMER3Q9NSC5 361 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 NLGN3Q9NZ94 848 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 VPS54Q9P1Q0 977 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 FAM153AQ9UHL3 310 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 DIMT1Q9UNQ2 313 aaKnown RBP2.28□□□□□ -2.04
CD47-203ENST00000398258 PLCL2Q9UPR0 1127 aa2.28□□□□□ -2.04
CD47-203ENST00000398258 IGLV7-46A0A075B6I9 117 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 IGKV3D-15A0A087WSY6 115 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 TRBV5-4A0A0C4DH59 114 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 A0A0U1RRA0 63 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 SH3PXD2BA1X283 911 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 BCLAF3A2AJT9 711 aaKnown RBP2.27□□□□□ -2.05
CD47-203ENST00000398258 KRT87PA6NCN2 255 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 OR5H15A6NDH6 313 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 ARHGAP42A6NI28 874 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 CCDC69A6NI79 296 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 YJEFN3A6XGL0 299 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 ZNF724A8MTY0 619 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 SOCS3O14543 225 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 TFECO14948 347 aaPredicted RBP2.27□□□□□ -2.05
CD47-203ENST00000398258 KIAA0513O60268 411 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 SNAP91O60641 907 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 HSF2BPO75031 334 aa2.27□□□□□ -2.05
CD47-203ENST00000398258 FRAT2O75474 233 aaPredicted RBP2.27□□□□□ -2.05
CD47-203ENST00000398258 OR6A2O95222 327 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms