RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 PCDHGB4Q9UN71 923 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 WASHC1A8K0Z3 465 aa18.37■□□□□ 0.53
PDLIM2-205ENST00000397761 CHST10O43529 356 aa18.37■□□□□ 0.53
PDLIM2-205ENST00000397761 LMNAP02545 664 aaKnown RBP18.37■□□□□ 0.53
PDLIM2-205ENST00000397761 GZMMP51124 257 aa18.37■□□□□ 0.53
PDLIM2-205ENST00000397761 SPIDRQ14159 915 aa18.37■□□□□ 0.53
PDLIM2-205ENST00000397761 KPNB1Q14974 876 aaKnown RBP18.37■□□□□ 0.53
PDLIM2-205ENST00000397761 C6orf163Q5TEZ5 329 aa18.37■□□□□ 0.53
PDLIM2-205ENST00000397761 C1orf146Q5VVC0 180 aa18.37■□□□□ 0.53
PDLIM2-205ENST00000397761 ASCL5Q7RTU5 278 aa18.37■□□□□ 0.53
PDLIM2-205ENST00000397761 CALHM3Q86XJ0 350 aa18.37■□□□□ 0.53
PDLIM2-205ENST00000397761 DTWD1Q8N5C7 304 aa18.37■□□□□ 0.53
PDLIM2-205ENST00000397761 ADAMTS18Q8TE60 1221 aa18.37■□□□□ 0.53
PDLIM2-205ENST00000397761 AURKBQ96GD4 344 aaPredicted RBP18.37■□□□□ 0.53
PDLIM2-205ENST00000397761 ZNF583Q96ND8 569 aa18.37■□□□□ 0.53
PDLIM2-205ENST00000397761 AMDHD1Q96NU7 426 aa18.37■□□□□ 0.53
PDLIM2-205ENST00000397761 RPF2Q9H7B2 306 aaKnown RBP18.37■□□□□ 0.53
PDLIM2-205ENST00000397761 FANCEQ9HB96 536 aa18.37■□□□□ 0.53
PDLIM2-205ENST00000397761 NEUROD4Q9HD90 331 aa18.37■□□□□ 0.53
PDLIM2-205ENST00000397761 CLIC1O00299 241 aa18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 BCAS2O75934 225 aaPredicted RBP18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 ABCB1P08183 1280 aaPredicted RBP18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 PPIBP23284 216 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 AVPR1BP47901 424 aa18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 BNIP2Q12982 314 aa18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 FAM180BQ6P0A1 224 aa18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 MED25Q71SY5 747 aa18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 GPR135Q8IZ08 494 aa18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 SAMD14Q8IZD0 417 aaPredicted RBP18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 TRIML2Q8N7C3 387 aa18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 FAM156AQ8NDB6 213 aa18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 RCBTB1Q8NDN9 531 aa18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 SUN3Q8TAQ9 357 aa18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 THUMPD3Q9BV44 507 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 MUC13Q9H3R2 512 aa18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 GLIPR2Q9H4G4 154 aa18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 SYNDIG1Q9H7V2 258 aa18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 TPT1P8Q9HAU6 139 aa18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 SIRT3Q9NTG7 399 aaPredicted RBP18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 IRAK4Q9NWZ3 460 aa18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 GMPR2Q9P2T1 348 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 NCDNQ9UBB6 729 aa18.36■□□□□ 0.53
PDLIM2-205ENST00000397761 BLACEA4D250 179 aa18.35■□□□□ 0.53
PDLIM2-205ENST00000397761 ZNF749O43361 778 aa18.35■□□□□ 0.53
PDLIM2-205ENST00000397761 ENTPD5O75356 428 aa18.35■□□□□ 0.53
PDLIM2-205ENST00000397761 RNH1P13489 461 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-205ENST00000397761 HTR1EP28566 365 aa18.35■□□□□ 0.53
PDLIM2-205ENST00000397761 NTSP30990 170 aa18.35■□□□□ 0.53
PDLIM2-205ENST00000397761 PDX1P52945 283 aa18.35■□□□□ 0.53
PDLIM2-205ENST00000397761 ARSFP54793 590 aa18.35■□□□□ 0.53
PDLIM2-205ENST00000397761 MANFP55145 182 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-205ENST00000397761 SHC2P98077 582 aa18.35■□□□□ 0.53
PDLIM2-205ENST00000397761 ILKQ13418 452 aa18.35■□□□□ 0.53
PDLIM2-205ENST00000397761 ZNF551Q7Z340 670 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-205ENST00000397761 ZFP28Q8NHY6 868 aa18.35■□□□□ 0.53
PDLIM2-205ENST00000397761 TANKQ92844 425 aa18.35■□□□□ 0.53
PDLIM2-205ENST00000397761 ECSITQ9BQ95 431 aa18.35■□□□□ 0.53
PDLIM2-205ENST00000397761 DPH2Q9BQC3 489 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-205ENST00000397761 EPS8L2Q9H6S3 715 aa18.35■□□□□ 0.53
PDLIM2-205ENST00000397761 CXorf36Q9H7Y0 433 aa18.35■□□□□ 0.53
PDLIM2-205ENST00000397761 CORO2BQ9UQ03 480 aa18.35■□□□□ 0.53
PDLIM2-205ENST00000397761 PCDHB3Q9Y5E6 796 aa18.35■□□□□ 0.53
PDLIM2-205ENST00000397761 EVPLLA8MZ36 301 aa18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 DSCR3O14972 297 aa18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 NVLO15381 856 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 FOXD2O60548 495 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 CSNK2A2P19784 350 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 TCN1P20061 433 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 UQCRC2P22695 453 aa18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 MSX2P35548 267 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 MVDP53602 400 aa18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 SIM1P81133 766 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 DUSP2Q05923 314 aa18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 ABHD18Q0P651 414 aa18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 CCNIQ14094 377 aa18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 SERPINA11Q86U17 422 aa18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 SHISA5Q8N114 240 aa18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 C10orf111Q8N326 155 aa18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 TMEM52Q8NDY8 209 aa18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 OR4K14Q8NGD5 310 aa18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 BBS4Q96RK4 519 aa18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 CDC6Q99741 560 aa18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 KCTD14Q9BQ13 255 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 CHST8Q9H2A9 424 aa18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 GIMAP4Q9NUV9 329 aa18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 ENTPD4Q9Y227 616 aa18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 TMEM184BQ9Y519 407 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 CCDC88CQ9P219 2028 aa18.34■□□□□ 0.53
PDLIM2-205ENST00000397761 C4orf47A7E2U8 309 aa18.33■□□□□ 0.53
PDLIM2-205ENST00000397761 ERAL1O75616 437 aaKnown RBP18.33■□□□□ 0.53
PDLIM2-205ENST00000397761 C1QCP02747 245 aa18.33■□□□□ 0.53
PDLIM2-205ENST00000397761 CCKBRP32239 447 aa18.33■□□□□ 0.53
PDLIM2-205ENST00000397761 FLOT2Q14254 428 aa18.33■□□□□ 0.53
PDLIM2-205ENST00000397761 CPZQ66K79 652 aa18.33■□□□□ 0.53
PDLIM2-205ENST00000397761 TMEM64Q6YI46 380 aa18.33■□□□□ 0.53
PDLIM2-205ENST00000397761 B3GNT8Q7Z7M8 397 aa18.33■□□□□ 0.53
PDLIM2-205ENST00000397761 BPHLQ86WA6 291 aaPredicted RBP18.33■□□□□ 0.53
PDLIM2-205ENST00000397761 OR10A6Q8NH74 314 aa18.33■□□□□ 0.53
PDLIM2-205ENST00000397761 JADE3Q92613 823 aa18.33■□□□□ 0.53
PDLIM2-205ENST00000397761 MMABQ96EY8 250 aaPredicted RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms