RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 ELF4Q99607 663 aaPredicted RBP11.87□□□□□ -0.51
SMU1-201ENST00000397149 CDC6Q99741 560 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.87□□□□□ -0.51
SMU1-201ENST00000397149 POP7O75817 140 aaKnown RBP11.87□□□□□ -0.51
SMU1-201ENST00000397149 ATG12O94817 140 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 SQSTM1Q13501 440 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 C1orf61Q13536 156 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 DHCR24Q15392 516 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 CHRNA6Q15825 494 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 ACSBG2Q5FVE4 666 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 RGMBQ6NW40 437 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 KLHDC10Q6PID8 442 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 GTPBP8Q8N3Z3 284 aaPredicted RBP11.87□□□□□ -0.51
SMU1-201ENST00000397149 FAM83FQ8NEG4 500 aaPredicted RBP11.87□□□□□ -0.51
SMU1-201ENST00000397149 OR2AP1Q8NGE2 309 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 OR14L1PQ8NHC6 308 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 MSI2Q96DH6 328 aaKnown RBP11.87□□□□□ -0.51
SMU1-201ENST00000397149 TWNKQ96RR1 684 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 MMP3P08254 477 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 PRPS1L1P21108 318 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 DNASE1P24855 282 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 NDUFS1P28331 727 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 USP53Q70EK8 1073 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 ADGRA1Q86SQ6 560 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 LHFPL3Q86UP9 236 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 ZFP41Q8N8Y5 198 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 SORCS1Q8WY21 1168 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 MCHR1Q99705 422 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 SLC25A51Q9H1U9 297 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 A0A1W2PPV4 95 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 CSTAP01040 98 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 TIMP2P16035 220 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 GRM5P41594 1212 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 SF3A2Q15428 464 aaKnown RBP11.86□□□□□ -0.51
SMU1-201ENST00000397149 MYLK3Q32MK0 819 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 KHDC1Q4VXA5 237 aaKnown RBP11.86□□□□□ -0.51
SMU1-201ENST00000397149 TMEM198Q66K66 360 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 Q6ZVU0 165 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 OR51D1Q8NGF3 324 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 GNPDA2Q8TDQ7 276 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 CCM2Q9BSQ5 444 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 NAA11Q9BSU3 229 aaPredicted RBP11.86□□□□□ -0.51
SMU1-201ENST00000397149 SYNPO2LQ9H987 977 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 FNIP2Q9P278 1114 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 KLHL9Q9P2J3 617 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 RHBDD3Q9Y3P4 386 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 TRBV2A0A0J9YWF9 115 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 CRYM-AS1A6NIL9 109 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 SLC15A5A6NIM6 579 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 HLA-EP13747 358 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 VARS2Q5ST30 1063 aaKnown RBP11.86□□□□□ -0.51
SMU1-201ENST00000397149 PAQR3Q6TCH7 311 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 CYP4V2Q6ZWL3 525 aaPredicted RBP11.86□□□□□ -0.51
SMU1-201ENST00000397149 TAC4Q86UU9 113 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 XYLT1Q86Y38 959 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 OR4K15Q8NH41 348 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 NEIL3Q8TAT5 605 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 MOAP1Q96BY2 351 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 PCED1BQ96HM7 432 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 MAELQ96JY0 434 aaKnown RBP11.86□□□□□ -0.51
SMU1-201ENST00000397149 RNF32Q9H0A6 362 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 PPIL3Q9H2H8 161 aaKnown RBP11.86□□□□□ -0.51
SMU1-201ENST00000397149 HRASLS2Q9NWW9 162 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 RFPL1O75677 317 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 TXNDC12O95881 172 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 TBX18O95935 607 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 HOXC6P09630 235 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 CDH1P12830 882 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 JUPP14923 745 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 GCH1P30793 250 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 ZBED5Q49AG3 693 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 C14orf28Q4W4Y0 310 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 LIN28AQ9H9Z2 209 aaKnown RBP11.86□□□□□ -0.51
SMU1-201ENST00000397149 ACSL5Q9ULC5 683 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 MEIS2O14770 477 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 MATN3O15232 486 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 ESR1P03372 595 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 FBLP22087 321 aaKnown RBP11.86□□□□□ -0.51
SMU1-201ENST00000397149 ASPAP45381 313 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 POU6F2P78424 691 aaPredicted RBP11.86□□□□□ -0.51
SMU1-201ENST00000397149 PLCXD2Q0VAA5 305 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 ZNF542PQ5EBM4 170 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 BCL2L15Q5TBC7 163 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 MBLAC2Q68D91 279 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 OR2T5Q6IEZ7 315 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 STRADAQ7RTN6 431 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 FAM160A2Q8N612 972 aaPredicted RBP11.86□□□□□ -0.51
SMU1-201ENST00000397149 OR2T29Q8NH02 315 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 TMEM234Q8WY98 164 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 TMEM209Q96SK2 561 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 FAIMQ9NVQ4 179 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 NRKQ7Z2Y5 1582 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 CILPO75339 1184 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 CBX7O95931 251 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 CHRNEQ04844 493 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 C6orf141Q5SZD1 244 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 KCTD18Q6PI47 426 aaPredicted RBP11.86□□□□□ -0.51
SMU1-201ENST00000397149 UGT2A3Q6UWM9 527 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 NLRP8Q86W28 1048 aa11.86□□□□□ -0.51
SMU1-201ENST00000397149 RBM24Q9BX46 236 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms