RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 UNC119BA6NIH7 251 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 PTNP21246 168 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 RGS6P49758 472 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 NR0B1P51843 470 aaKnown RBP13.44□□□□□ -0.26
COL4A3-202ENST00000396578 RPS24P62847 133 aaKnown RBP13.44□□□□□ -0.26
COL4A3-202ENST00000396578 SLC10A6Q3KNW5 377 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 C10orf62Q5T681 223 aaPredicted RBP13.44□□□□□ -0.26
COL4A3-202ENST00000396578 CLEC20AQ6ZU45 233 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 TICAM1Q8IUC6 712 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 MMAAQ8IVH4 418 aaKnown RBP13.44□□□□□ -0.26
COL4A3-202ENST00000396578 OR56B2PQ8NGI1 322 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 ABCG5Q9H222 651 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 EDDM13A0A1B0GTR0 161 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 PEX12O00623 359 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 GSCP56915 257 aaPredicted RBP13.44□□□□□ -0.26
COL4A3-202ENST00000396578 AKR1C8PQ5T2L2 129 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 GTPBP8Q8N3Z3 284 aaPredicted RBP13.44□□□□□ -0.26
COL4A3-202ENST00000396578 OR6Q1Q8NGQ2 317 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 SLC25A44Q96H78 314 aaPredicted RBP13.44□□□□□ -0.26
COL4A3-202ENST00000396578 MCHR1Q99705 422 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 SARDHQ9UL12 918 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 C11orf98E9PRG8 122 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 POLR1CO15160 346 aaPredicted RBP13.44□□□□□ -0.26
COL4A3-202ENST00000396578 ADH5P11766 374 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 ANKRD54Q6NXT1 300 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 ARL11Q969Q4 196 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 P2RY13Q9BPV8 354 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 ANKRD33BA6NCL7 494 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 MTX2O75431 263 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 CAPN15O75808 1086 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 IL1R2P27930 398 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 CD34P28906 385 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 ALDH3B1P43353 468 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 HK3P52790 923 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 ACTBP60709 375 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 ACTG1P63261 375 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 NTRK2Q16620 822 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 C2CD4AQ8NCU7 369 aaPredicted RBP13.44□□□□□ -0.26
COL4A3-202ENST00000396578 BBS10Q8TAM1 723 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 PCTPQ9UKL6 214 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 DLGAP4Q9Y2H0 992 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 RNF215Q9Y6U7 377 aa13.44□□□□□ -0.26
COL4A3-202ENST00000396578 SOBPA7XYQ1 873 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 GPX6P59796 221 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 KCNAB2Q13303 367 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 ZNF674Q2M3X9 581 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 C6orf141Q5SZD1 244 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 GPRC6AQ5T6X5 926 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 TMEM151AQ8N4L1 468 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 TSPEARQ8WU66 669 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 AOC2O75106 756 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 CLDN7O95471 211 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 GDF5P43026 501 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 POU6F2P78424 691 aaPredicted RBP13.43□□□□□ -0.26
COL4A3-202ENST00000396578 PMS2P3Q13401 168 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 LIPJQ5W064 366 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 MARVELD2Q8N4S9 558 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 GLYATL2Q8WU03 294 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 DNTTIP1Q9H147 329 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 TUBG2Q9NRH3 451 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 KIDINS220Q9ULH0 1771 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 CCDC163A0A0D9SF12 145 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 TSTD3H0UI37 97 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 RHCEP18577 417 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 ART1P52961 327 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 FUT2Q10981 343 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 ECH1Q13011 328 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 GAS6Q14393 721 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 GK2Q14410 553 aaPredicted RBP13.43□□□□□ -0.26
COL4A3-202ENST00000396578 BATFQ16520 125 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 OTOP2Q7RTS6 562 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 DCUN1D3Q8IWE4 304 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 OR4E2Q8NGC2 313 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 OR4K14Q8NGD5 310 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 PIGVQ9NUD9 493 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 GOSR2O14653 212 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 UCHL1P09936 223 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 OR8U9P0C7N5 309 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 HOXA10P31260 410 aaPredicted RBP13.43□□□□□ -0.26
COL4A3-202ENST00000396578 SCNN1AP37088 669 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 RPL35P42766 123 aaKnown RBP13.43□□□□□ -0.26
COL4A3-202ENST00000396578 FLT3LGP49771 235 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 CPT1CQ8TCG5 803 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 CNTNAP3BQ96NU0 1288 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 UBE2J1Q9Y385 318 aaPredicted RBP13.43□□□□□ -0.26
COL4A3-202ENST00000396578 COL3A1P02461 1466 aaPredicted RBP13.43□□□□□ -0.26
COL4A3-202ENST00000396578 PPP1R11O60927 126 aaPredicted RBP13.43□□□□□ -0.26
COL4A3-202ENST00000396578 SLC28A3Q9HAS3 691 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 KLHL21Q9UJP4 597 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 AP1M2Q9Y6Q5 423 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 A0A1B0GV50 99 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 PENKP01210 267 aaPredicted RBP13.43□□□□□ -0.26
COL4A3-202ENST00000396578 CLCN2P51788 898 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 DEDD2Q8WXF8 326 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 DNAJC5Q9H3Z4 198 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 MAGIXQ9H6Y5 334 aa13.43□□□□□ -0.26
COL4A3-202ENST00000396578 UPK3BL1B0FP48 263 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 UPK3BL2E5RIL1 263 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 BRINP1O60477 761 aa13.42□□□□□ -0.26
COL4A3-202ENST00000396578 DUSP11O75319 330 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms