RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 ENTPD4Q9Y227 616 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 ASB4Q9Y574 426 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 GMPPBQ9Y5P6 360 aa14.17□□□□□ -0.14
CBX3-202ENST00000396386 TMEM247A6NEH6 219 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 SHISA7A6NL88 538 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 SLC1A7O00341 560 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 PRAMEF10O60809 474 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 B4GALT2O60909 372 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 PDE9AO76083 593 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 AIFM1O95831 613 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 ASGR2P07307 311 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 OR1E2P47887 323 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 CLK3P49761 638 aaKnown RBP14.16□□□□□ -0.14
CBX3-202ENST00000396386 NCBP2P52298 156 aaKnown RBP eCLIP14.16□□□□□ -0.14
CBX3-202ENST00000396386 RGS1Q08116 209 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 SIM2Q14190 667 aaPredicted RBP14.16□□□□□ -0.14
CBX3-202ENST00000396386 RAB39AQ14964 217 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 RPS26P11Q5JNZ5 115 aaPredicted RBP14.16□□□□□ -0.14
CBX3-202ENST00000396386 SZRD1Q7Z422 152 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 ABI3BPQ7Z7G0 1075 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 NRROSQ86YC3 692 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 CLVS1Q8IUQ0 354 aaPredicted RBP14.16□□□□□ -0.14
CBX3-202ENST00000396386 FLCNQ8NFG4 579 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 SFXN5Q8TD22 340 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 SLC38A5Q8WUX1 472 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 ZNF566Q969W8 418 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 GAL3ST3Q96A11 431 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 TMEM19Q96HH6 336 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 TUBA1CQ9BQE3 449 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 SYNPO2LQ9H987 977 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 POLMQ9NP87 494 aaPredicted RBP14.16□□□□□ -0.14
CBX3-202ENST00000396386 SEMA3GQ9NS98 782 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 EBF1Q9UH73 591 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 NDRG2Q9UN36 371 aaKnown RBP14.16□□□□□ -0.14
CBX3-202ENST00000396386 A0A1W2PR48 441 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 C10orf142B7Z368 130 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 PRAMEF26H0Y7S4 382 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 ZNF701M0R085 212 aaPredicted RBP14.16□□□□□ -0.14
CBX3-202ENST00000396386 HMGN4O00479 90 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 PRKRAO75569 313 aaKnown RBP14.16□□□□□ -0.14
CBX3-202ENST00000396386 IGLV3-19P01714 112 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 JUNBP17275 347 aaPredicted RBP14.16□□□□□ -0.14
CBX3-202ENST00000396386 IGFBP4P22692 258 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 SLC5A2P31639 672 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 XCR1P46094 333 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 KHKP50053 298 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 CCR5P51681 352 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 CDH12P55289 794 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 RAB8AP61006 207 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 PMS2P3Q13401 168 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 NEDD8Q15843 81 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 KIAA0895LQ68EN5 471 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 TMEM64Q6YI46 380 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 ASPGQ86U10 573 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 SMYD1Q8NB12 490 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 OR13H1Q8NG92 308 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 OR4C15Q8NGM1 316 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 NT5CQ8TCD5 201 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 RAB8BQ92930 207 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 PITX2Q99697 317 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 PIP5K1AQ99755 562 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 GABARAPL3Q9BY60 117 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 C6orf106Q9H6K1 298 aaPredicted RBP14.16□□□□□ -0.14
CBX3-202ENST00000396386 ZCCHC3Q9NUD5 404 aaKnown RBP14.16□□□□□ -0.14
CBX3-202ENST00000396386 P2RX2Q9UBL9 471 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 FBXW2Q9UKT8 454 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 ZNF451Q9Y4E5 1061 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 ATG4BQ9Y4P1 393 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 MYO10Q9HD67 2058 aa14.16□□□□□ -0.14
CBX3-202ENST00000396386 TRBV23OR9-2A0A075B6M9 112 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 OR2A25A4D2G3 310 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 PRAMEF25A6NGN4 478 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 GLOD5A6NK44 160 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 TNFP01375 233 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 IFNW1P05000 195 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 IGHV4-34P06331 123 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 TFPTP0C1Z6 253 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 CCDC159P0C7I6 412 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 UGT2B7P16662 529 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 AGXTP21549 392 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 CD72P21854 359 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 MAGEA8P43361 318 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 NUP107P57740 925 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 KCNC4Q03721 635 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 SMAD4Q13485 552 aaKnown RBP14.15□□□□□ -0.14
CBX3-202ENST00000396386 CWF19L1Q69YN2 538 aaKnown RBP14.15□□□□□ -0.14
CBX3-202ENST00000396386 LAIR2Q6ISS4 152 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 VN1R4Q7Z5H5 301 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 TRIM73Q86UV7 250 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 SLC44A2Q8IWA5 706 aaPredicted RBP14.15□□□□□ -0.14
CBX3-202ENST00000396386 OR10G2Q8NGC3 310 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 FLVCR1-AS1Q8TAF5 88 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 ISOC1Q96CN7 298 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 TWSG1Q9GZX9 223 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 SERHL2Q9H4I8 314 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 CXorf21Q9HAI6 301 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 GIMAP4Q9NUV9 329 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 ANKMY1Q9P2S6 941 aa14.15□□□□□ -0.14
CBX3-202ENST00000396386 NDRG4Q9ULP0 352 aaKnown RBP14.15□□□□□ -0.14
CBX3-202ENST00000396386 FAM32AQ9Y421 112 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms