RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 GBAP04062 536 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 INHBAP08476 426 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 PTX3P26022 381 aaPredicted RBP16.97■□□□□ 0.31
FXN-203ENST00000396366 BSGP35613 385 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 STT3AP46977 705 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 IGLV3-21P80748 117 aaPredicted RBP16.97■□□□□ 0.31
FXN-203ENST00000396366 FOLH1Q04609 750 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 CMPK2Q5EBM0 449 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 MTFR2Q6P444 385 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 RPS27LQ71UM5 84 aaKnown RBP16.97■□□□□ 0.31
FXN-203ENST00000396366 SLC34A3Q8N130 599 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 ZCCHC7Q8N3Z6 543 aaKnown RBP16.97■□□□□ 0.31
FXN-203ENST00000396366 L3MBTL4Q8NA19 623 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 ZFP62Q8NB50 900 aaPredicted RBP16.97■□□□□ 0.31
FXN-203ENST00000396366 POGLUT1Q8NBL1 392 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 PSD4Q8NDX1 1056 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 OR52N2Q8NGI0 321 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 C16orf52Q8NHV5 167 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 AGAP11Q8TF27 550 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 DCAKDQ8WVC6 231 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 ISL2Q96A47 359 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 SENP5Q96HI0 755 aaPredicted RBP16.97■□□□□ 0.31
FXN-203ENST00000396366 SCYL1Q96KG9 808 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 NSUN5Q96P11 429 aaKnown RBP16.97■□□□□ 0.31
FXN-203ENST00000396366 FMO2Q99518 471 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 HPF1Q9NWY4 346 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 ASB4Q9Y574 426 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 TNPO3Q9Y5L0 923 aaKnown RBP16.97■□□□□ 0.31
FXN-203ENST00000396366 HRH3Q9Y5N1 445 aa16.97■□□□□ 0.31
FXN-203ENST00000396366 ABCA12Q86UK0 2595 aa16.96■□□□□ 0.31
FXN-203ENST00000396366 A0A1W2PR48 441 aa16.96■□□□□ 0.31
FXN-203ENST00000396366 ADAM10O14672 748 aa16.96■□□□□ 0.31
FXN-203ENST00000396366 PROM1O43490 865 aa16.96■□□□□ 0.31
FXN-203ENST00000396366 CDC40O60508 579 aaKnown RBP eCLIP16.96■□□□□ 0.31
FXN-203ENST00000396366 HTR1EP28566 365 aa16.96■□□□□ 0.31
FXN-203ENST00000396366 TNFRSF17Q02223 184 aa16.96■□□□□ 0.31
FXN-203ENST00000396366 CEP128Q6ZU80 1094 aa16.96■□□□□ 0.31
FXN-203ENST00000396366 DGAT2Q96PD7 388 aa16.96■□□□□ 0.31
FXN-203ENST00000396366 DEFB127Q9H1M4 99 aa16.96■□□□□ 0.31
FXN-203ENST00000396366 ZBTB26Q9HCK0 441 aa16.96■□□□□ 0.31
FXN-203ENST00000396366 XPR1Q9UBH6 696 aa16.96■□□□□ 0.31
FXN-203ENST00000396366 CSMD1Q96PZ7 3565 aa16.96■□□□□ 0.31
FXN-203ENST00000396366 MYO9AB2RTY4 2548 aa16.96■□□□□ 0.3
FXN-203ENST00000396366 A0A0A6YYD5 115 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 A0A1B0GTL3 188 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 TRIM49D1C9J1S8 452 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 PPP6CO00743 305 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 HNRNPRO43390 633 aaKnown RBP16.95■□□□□ 0.3
FXN-203ENST00000396366 UGDHO60701 494 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 CLDN9O95484 217 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 TUBB4AP04350 444 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 SBK3P0C264 359 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 CTAGE8P0CG41 777 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 ARL1P40616 181 aaPredicted RBP16.95■□□□□ 0.3
FXN-203ENST00000396366 ASPHQ12797 758 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 CUL3Q13618 768 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 MRM1Q6IN84 353 aaKnown RBP16.95■□□□□ 0.3
FXN-203ENST00000396366 RPTNQ6XPR3 784 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 CTAGE4Q8IX94 777 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 C9orf40Q8IXQ3 194 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 SRRM1Q8IYB3 904 aaKnown RBP16.95■□□□□ 0.3
FXN-203ENST00000396366 MNS1Q8NEH6 495 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 OR2M7Q8NG81 312 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 OR8K3Q8NH51 312 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 TANKQ92844 425 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 ATP6V1E2Q96A05 226 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 REPS1Q96D71 796 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 RBM18Q96H35 190 aaKnown RBP16.95■□□□□ 0.3
FXN-203ENST00000396366 CENPKQ9BS16 269 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 DDX31Q9H8H2 851 aaKnown RBP16.95■□□□□ 0.3
FXN-203ENST00000396366 MS4A12Q9NXJ0 267 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 PHF11Q9UIL8 331 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 PCTPQ9UKL6 214 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 KLF2Q9Y5W3 355 aaPredicted RBP16.95■□□□□ 0.3
FXN-203ENST00000396366 IKBKGQ9Y6K9 419 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 FBN2P35556 2912 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 DCHS2Q6V1P9 2916 aa16.95■□□□□ 0.3
FXN-203ENST00000396366 CREBBPQ92793 2442 aa16.94■□□□□ 0.3
FXN-203ENST00000396366 A0A1W2PS29 197 aa16.94■□□□□ 0.3
FXN-203ENST00000396366 SYNDIG1LA6NDD5 238 aa16.94■□□□□ 0.3
FXN-203ENST00000396366 FAM166BA8MTA8 275 aa16.94■□□□□ 0.3
FXN-203ENST00000396366 C19orf84I3L1E1 186 aa16.94■□□□□ 0.3
FXN-203ENST00000396366 IGKV3-11P04433 115 aa16.94■□□□□ 0.3
FXN-203ENST00000396366 SNRPB2P08579 225 aaKnown RBP16.94■□□□□ 0.3
FXN-203ENST00000396366 RBP1P09455 135 aa16.94■□□□□ 0.3
FXN-203ENST00000396366 FAM58BPP0C7Q3 252 aa16.94■□□□□ 0.3
FXN-203ENST00000396366 SERPINB9P50453 376 aa16.94■□□□□ 0.3
FXN-203ENST00000396366 ZNF630Q2M218 657 aaPredicted RBP16.94■□□□□ 0.3
FXN-203ENST00000396366 SGO1Q5FBB7 561 aa16.94■□□□□ 0.3
FXN-203ENST00000396366 XKRXQ6PP77 449 aa16.94■□□□□ 0.3
FXN-203ENST00000396366 BNC2Q6ZN30 1099 aaPredicted RBP16.94■□□□□ 0.3
FXN-203ENST00000396366 GPALPP1Q8IXQ4 340 aa16.94■□□□□ 0.3
FXN-203ENST00000396366 TMEM151AQ8N4L1 468 aa16.94■□□□□ 0.3
FXN-203ENST00000396366 OR5L2Q8NGL0 311 aa16.94■□□□□ 0.3
FXN-203ENST00000396366 TSPYL1Q9H0U9 437 aa16.94■□□□□ 0.3
FXN-203ENST00000396366 SEMA4BQ9NPR2 832 aaPredicted RBP16.94■□□□□ 0.3
FXN-203ENST00000396366 COPS7AQ9UBW8 275 aa16.94■□□□□ 0.3
FXN-203ENST00000396366 ZNF407Q9C0G0 2248 aa16.94■□□□□ 0.3
FXN-203ENST00000396366 FOXE1O00358 373 aaPredicted RBP16.93■□□□□ 0.3
FXN-203ENST00000396366 PRRG2O14669 202 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms