RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 LPAR4Q99677 370 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 WDR77Q9BQA1 342 aaPredicted RBP17.99■□□□□ 0.47
HOXA9-202ENST00000396345 PNO1Q9NRX1 252 aaKnown RBP17.99■□□□□ 0.47
HOXA9-202ENST00000396345 MARCOQ9UEW3 520 aaPredicted RBP17.99■□□□□ 0.47
HOXA9-202ENST00000396345 TMED5Q9Y3A6 229 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 A6NL46 340 aa17.98■□□□□ 0.47
HOXA9-202ENST00000396345 ERVH48-1M5A8F1 160 aa17.98■□□□□ 0.47
HOXA9-202ENST00000396345 PEX11AO75192 247 aa17.98■□□□□ 0.47
HOXA9-202ENST00000396345 GPR75O95800 540 aa17.98■□□□□ 0.47
HOXA9-202ENST00000396345 IFNA16P05015 189 aa17.98■□□□□ 0.47
HOXA9-202ENST00000396345 IL3P08700 152 aa17.98■□□□□ 0.47
HOXA9-202ENST00000396345 POLE2P56282 527 aa17.98■□□□□ 0.47
HOXA9-202ENST00000396345 ZNF763Q0D2J5 394 aa17.98■□□□□ 0.47
HOXA9-202ENST00000396345 BIKQ13323 160 aa17.98■□□□□ 0.47
HOXA9-202ENST00000396345 ATP6AP1LQ52LC2 224 aa17.98■□□□□ 0.47
HOXA9-202ENST00000396345 RFTN2Q52LD8 501 aaPredicted RBP17.98■□□□□ 0.47
HOXA9-202ENST00000396345 CRLF3Q8IUI8 442 aa17.98■□□□□ 0.47
HOXA9-202ENST00000396345 MMP21Q8N119 569 aa17.98■□□□□ 0.47
HOXA9-202ENST00000396345 GALNT16Q8N428 558 aa17.98■□□□□ 0.47
HOXA9-202ENST00000396345 CDC26Q8NHZ8 85 aa17.98■□□□□ 0.47
HOXA9-202ENST00000396345 DNAJB14Q8TBM8 379 aa17.98■□□□□ 0.47
HOXA9-202ENST00000396345 FCRL1Q96LA6 429 aa17.98■□□□□ 0.47
HOXA9-202ENST00000396345 NUF2Q9BZD4 464 aa17.98■□□□□ 0.47
HOXA9-202ENST00000396345 GIMAP2Q9UG22 337 aa17.98■□□□□ 0.47
HOXA9-202ENST00000396345 FAM208BQ5VWN6 2430 aa17.98■□□□□ 0.47
HOXA9-202ENST00000396345 SLCO1B7G3V0H7 640 aa17.97■□□□□ 0.47
HOXA9-202ENST00000396345 ICAM2P13598 275 aa17.97■□□□□ 0.47
HOXA9-202ENST00000396345 DRD2P14416 443 aa17.97■□□□□ 0.47
HOXA9-202ENST00000396345 ITGA3P26006 1051 aa17.97■□□□□ 0.47
HOXA9-202ENST00000396345 PIK3R1P27986 724 aa17.97■□□□□ 0.47
HOXA9-202ENST00000396345 ALDH9A1P49189 494 aa17.97■□□□□ 0.47
HOXA9-202ENST00000396345 HK2P52789 917 aa17.97■□□□□ 0.47
HOXA9-202ENST00000396345 IGLV3-21P80748 117 aaPredicted RBP17.97■□□□□ 0.47
HOXA9-202ENST00000396345 Q0VFX4 171 aa17.97■□□□□ 0.47
HOXA9-202ENST00000396345 HEPACAMQ14CZ8 416 aa17.97■□□□□ 0.47
HOXA9-202ENST00000396345 C6orf136Q5SQH8 315 aa17.97■□□□□ 0.47
HOXA9-202ENST00000396345 RIPOR1Q6ZS17 1223 aa17.97■□□□□ 0.47
HOXA9-202ENST00000396345 KBTBD2Q8IY47 623 aa17.97■□□□□ 0.47
HOXA9-202ENST00000396345 TMEM132CQ8N3T6 1108 aa17.97■□□□□ 0.47
HOXA9-202ENST00000396345 OR4K14Q8NGD5 310 aa17.97■□□□□ 0.47
HOXA9-202ENST00000396345 C7orf26Q96N11 449 aa17.97■□□□□ 0.47
HOXA9-202ENST00000396345 ADAP2Q9NPF8 381 aa17.97■□□□□ 0.47
HOXA9-202ENST00000396345 HEY2Q9UBP5 337 aa17.97■□□□□ 0.47
HOXA9-202ENST00000396345 VTI1BQ9UEU0 232 aa17.97■□□□□ 0.47
HOXA9-202ENST00000396345 WBP11Q9Y2W2 641 aaKnown RBP17.97■□□□□ 0.47
HOXA9-202ENST00000396345 PIEZO2Q9H5I5 2752 aa17.96■□□□□ 0.47
HOXA9-202ENST00000396345 SAGE2PA6NJ88 616 aa17.96■□□□□ 0.47
HOXA9-202ENST00000396345 HDAC3O15379 428 aa17.96■□□□□ 0.47
HOXA9-202ENST00000396345 SERPINA7P05543 415 aa17.96■□□□□ 0.47
HOXA9-202ENST00000396345 FAM87AP0C7U9 286 aa17.96■□□□□ 0.47
HOXA9-202ENST00000396345 MAPK1P28482 360 aa17.96■□□□□ 0.47
HOXA9-202ENST00000396345 SOX8P57073 446 aa17.96■□□□□ 0.47
HOXA9-202ENST00000396345 C2orf80Q0P641 193 aa17.96■□□□□ 0.47
HOXA9-202ENST00000396345 ELAVL1Q15717 326 aaKnown RBP17.96■□□□□ 0.47
HOXA9-202ENST00000396345 EXT1Q16394 746 aa17.96■□□□□ 0.47
HOXA9-202ENST00000396345 BTBD16Q32M84 506 aa17.96■□□□□ 0.47
HOXA9-202ENST00000396345 PLAG1Q6DJT9 500 aa17.96■□□□□ 0.47
HOXA9-202ENST00000396345 SLC48A1Q6P1K1 146 aa17.96■□□□□ 0.47
HOXA9-202ENST00000396345 WDR75Q8IWA0 830 aaKnown RBP17.96■□□□□ 0.47
HOXA9-202ENST00000396345 FNDC5Q8NAU1 212 aa17.96■□□□□ 0.47
HOXA9-202ENST00000396345 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.96■□□□□ 0.47
HOXA9-202ENST00000396345 PIWIL2Q8TC59 973 aaKnown RBP17.96■□□□□ 0.47
HOXA9-202ENST00000396345 THOC3Q96J01 351 aaKnown RBP17.96■□□□□ 0.47
HOXA9-202ENST00000396345 DGAT2Q96PD7 388 aa17.96■□□□□ 0.47
HOXA9-202ENST00000396345 AKTIPQ9H8T0 292 aa17.96■□□□□ 0.47
HOXA9-202ENST00000396345 MEAF6Q9HAF1 191 aa17.96■□□□□ 0.47
HOXA9-202ENST00000396345 MYNNQ9NPC7 610 aa17.96■□□□□ 0.47
HOXA9-202ENST00000396345 SLCO1B3Q9NPD5 702 aa17.96■□□□□ 0.47
HOXA9-202ENST00000396345 C5AR2Q9P296 337 aa17.96■□□□□ 0.47
HOXA9-202ENST00000396345 CES1P1Q9UKY3 287 aa17.96■□□□□ 0.47
HOXA9-202ENST00000396345 PSME2Q9UL46 239 aa17.96■□□□□ 0.47
HOXA9-202ENST00000396345 TRPC5OSA6NMA1 111 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 MKRN2OSH3BPM6 223 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 VPS4BO75351 444 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 CEACAM4O75871 244 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 CELA2AP08217 269 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 PRR35P0CG20 571 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 BCKDHAP12694 445 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 ALOX15P16050 662 aaPredicted RBP17.95■□□□□ 0.46
HOXA9-202ENST00000396345 SDC1P18827 310 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 TNNI3P19429 210 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 TACR1P25103 407 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 STT3AP46977 705 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 XKP51811 444 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 SLC26A5P58743 744 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 AP2B1P63010 937 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 PLIN5Q00G26 463 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 KCNAB2Q13303 367 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 TERF2Q15554 542 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 IRAK1BP1Q5VVH5 260 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 FAM71E1Q6IPT2 247 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 IKBIPQ70UQ0 350 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 AMER2Q8N7J2 671 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 M1APQ8TC57 530 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 KLHL29Q96CT2 875 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 RBM18Q96H35 190 aaKnown RBP17.95■□□□□ 0.46
HOXA9-202ENST00000396345 C1orf50Q9BV19 199 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 LHPPQ9H008 270 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 ADNPQ9H2P0 1102 aa17.95■□□□□ 0.46
HOXA9-202ENST00000396345 G3BP2Q9UN86 482 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms