RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 SDK1Q7Z5N4 2213 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 IGHV1OR21-1A0A087WYE8 117 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 IGHV5-51A0A0C4DH38 117 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 RNF103-CHMP3A0A140T963 221 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 A0A1B0GTQ1 180 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 TMEM221A6NGB7 291 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 RHPN2P1A8MT19 583 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 M0R296 226 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 CYR61O00622 381 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 DLGAP1O14490 977 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 CLOCKO15516 846 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 NUDT21O43809 227 aaKnown RBP12.66□□□□□ -0.38
CLIC1-209ENST00000395892 B3GALT2O43825 422 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 TPST1O60507 370 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 SRPX2O60687 465 aaPredicted RBP12.66□□□□□ -0.38
CLIC1-209ENST00000395892 MT-ND1P03886 318 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 EIF2S1P05198 315 aaKnown RBP12.66□□□□□ -0.38
CLIC1-209ENST00000395892 ARAFP10398 606 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 MYF5P13349 255 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 SOX18P35713 384 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 CRATP43155 626 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 MAGEA2P43356 314 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 CCT3P49368 545 aaKnown RBP12.66□□□□□ -0.38
CLIC1-209ENST00000395892 GFERP55789 205 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 OR1D5P58170 312 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 TNFRSF17Q02223 184 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 CHRNB3Q05901 458 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 RBBP4Q09028 425 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 MYBPC3Q14896 1274 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 ZC3H12BQ5HYM0 836 aaKnown RBP12.66□□□□□ -0.38
CLIC1-209ENST00000395892 INTS11Q5TA45 600 aaKnown RBP12.66□□□□□ -0.38
CLIC1-209ENST00000395892 NKAIN2Q5VXU1 208 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 IRGCQ6NXR0 463 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 FAM92BQ6ZTR7 304 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 ABHD13Q7L211 337 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 EIF3MQ7L2H7 374 aaKnown RBP12.66□□□□□ -0.38
CLIC1-209ENST00000395892 CCDC116Q8IYX3 515 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 HORMAD2Q8N7B1 307 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 ARL10Q8N8L6 244 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 DTWD2Q8NBA8 298 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 C11orf65Q8NCR3 313 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 PPWD1Q96BP3 646 aaKnown RBP12.66□□□□□ -0.38
CLIC1-209ENST00000395892 SLC47A1Q96FL8 570 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 BTBD9Q96Q07 612 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 CSF3RQ99062 836 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 RSPO3Q9BXY4 272 aaPredicted RBP12.66□□□□□ -0.38
CLIC1-209ENST00000395892 RAD21L1Q9H4I0 556 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 ENAMQ9NRM1 1142 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 RAPGEFL1Q9UHV5 662 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 PHF11Q9UIL8 331 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 AK5Q9Y6K8 562 aa12.66□□□□□ -0.38
CLIC1-209ENST00000395892 CACNA1EQ15878 2313 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 LY6G6EA0A0G2JKS1 128 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 PRAMEF27A3QJZ7 478 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 H3BMH7 237 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 SOCS2O14508 198 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 DENRO43583 198 aaKnown RBP12.65□□□□□ -0.38
CLIC1-209ENST00000395892 LDLRP01130 860 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 RPSAP08865 295 aaKnown RBP12.65□□□□□ -0.38
CLIC1-209ENST00000395892 C8orf89P0DMQ9 161 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 NR2F6P10588 404 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 UQCRBP14927 111 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 GNSP15586 552 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 CSNK2A2P19784 350 aaPredicted RBP12.65□□□□□ -0.38
CLIC1-209ENST00000395892 CPN2P22792 545 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 CHI3L1P36222 383 aaPredicted RBP12.65□□□□□ -0.38
CLIC1-209ENST00000395892 FEN1P39748 380 aaKnown RBP12.65□□□□□ -0.38
CLIC1-209ENST00000395892 GPR3P46089 330 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 NCBP2P52298 156 aaKnown RBP eCLIP12.65□□□□□ -0.387e-44■□□□□ 10.6
CLIC1-209ENST00000395892 PCBP3P57721 371 aaKnown RBP12.65□□□□□ -0.38
CLIC1-209ENST00000395892 HSPB3Q12988 150 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 TBPL2Q6SJ96 375 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 TMEM64Q6YI46 380 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 USP53Q70EK8 1073 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 FKBP9P1Q75LS8 142 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 TSEN54Q7Z6J9 526 aaKnown RBP12.65□□□□□ -0.38
CLIC1-209ENST00000395892 GALNT10Q86SR1 603 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 CA13Q8N1Q1 262 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 GALNT4Q8N4A0 578 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 TMEM52Q8NDY8 209 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 OR10Q1Q8NGQ4 319 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 NCLNQ969V3 563 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 ZNF597Q96LX8 424 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 TGM7Q96PF1 710 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 BBS4Q96RK4 519 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 CIB1Q99828 191 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 NPLQ9BXD5 320 aaPredicted RBP12.65□□□□□ -0.38
CLIC1-209ENST00000395892 NEUROD4Q9HD90 331 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 A4GALTQ9NPC4 353 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 NTMQ9P121 344 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 FBXO4Q9UKT5 387 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 FAF1Q9UNN5 650 aaPredicted RBP12.65□□□□□ -0.38
CLIC1-209ENST00000395892 LRCH1Q9Y2L9 728 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 NAALAD2Q9Y3Q0 740 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 SNX8Q9Y5X2 465 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 U3KQA8 63 aa12.65□□□□□ -0.38
CLIC1-209ENST00000395892 PI4KAP42356 2102 aa12.64□□□□□ -0.39
CLIC1-209ENST00000395892 TLCD2A6NGC4 264 aa12.64□□□□□ -0.39
CLIC1-209ENST00000395892 FOXS1O43638 330 aa12.64□□□□□ -0.39
CLIC1-209ENST00000395892 ERAL1O75616 437 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms