RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, human

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-205	ENST00000395757	TSACC	Q96A04	125 aa	Predicted RBP	13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	LMLN	Q96KR4	655 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	NMNAT1	Q9HAN9	279 aa	Predicted RBP	13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	ACOT13	Q9NPJ3	140 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	VCAN	P13611	3396 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	SLC16A5	O15375	505 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	TSPAN9	O75954	239 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	NTN1	O95631	604 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	FUCA1	P04066	466 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	TPTE	P56180	551 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	LSM11	P83369	360 aa	Known RBP eCLIP	13.72	□□□□□ -0.21	1e-8	■□□□□ 10.3
SREBF1-205	ENST00000395757	RUNX1T1	Q06455	604 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	SPANXN2	Q5MJ10	180 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	MRPS30	Q9NP92	439 aa	Known RBP	13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	MKLN1	Q9UL63	735 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757		A0A1W2PQU0	124 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	EFCAB10	A6NFE3	127 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	HYAL3	O43820	417 aa	Predicted RBP	13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	TMCC2	O75069	709 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	PTH	P01270	115 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	GAST	P01350	101 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	RB1	P06400	928 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	PTGES3	Q15185	160 aa	Known RBP	13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	WSCD2	Q2TBF2	565 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	REEP3	Q6NUK4	255 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	ZNF547	Q8IVP9	402 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	OXR1	Q8N573	874 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	GEMIN6	Q8WXD5	167 aa	Known RBP	13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	C16orf58	Q96GQ5	468 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	OR5M11	Q96RB7	305 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	POLR2J2	Q9GZM3	115 aa	Known RBP	13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	OR51I1	Q9H343	314 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	PHPT1	Q9NRX4	125 aa	Predicted RBP	13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	GIMAP4	Q9NUV9	329 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	KLHL3	Q9UH77	587 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	ERGIC3	Q9Y282	383 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757	NEUROG3	Q9Y4Z2	214 aa		13.72	□□□□□ -0.21
SREBF1-205	ENST00000395757		A0A1W2PS29	197 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	NOTO	A8MTQ0	251 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	GPR37L1	O60883	481 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	SEC14L2	O76054	403 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	FURIN	P09958	794 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	SLAMF1	Q13291	335 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	GPR68	Q15743	365 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	CLPP	Q16740	277 aa	Predicted RBP	13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	KLHL12	Q53G59	568 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	CRB2	Q5IJ48	1285 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	SDE2	Q6IQ49	451 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	KIAA1161	Q6NSJ0	714 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	TECPR1	Q7Z6L1	1165 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	KRT73	Q86Y46	540 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	AMER2	Q8N7J2	671 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	ZNF557	Q8N988	423 aa	Predicted RBP	13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	OR8J2	Q8NGG1	315 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	CXorf40B	Q96DE9	158 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	RPP25	Q9BUL9	199 aa	Known RBP	13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	ITPA	Q9BY32	194 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	MAGIX	Q9H6Y5	334 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	ERVK13-1	Q9NX77	482 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	ENPP5	Q9UJA9	477 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	SLC9A8	Q9Y2E8	581 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	LINC01553	A4QN01	128 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757		H0Y8X5	98 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757		H0YIV9	168 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	PLPP1	O14494	284 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	LCMT2	O60294	686 aa	Known RBP	13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	CCDC159	P0C7I6	412 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	INPP1	P49441	399 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	XK	P51811	444 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	KCNJ10	P78508	379 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	HYAL2	Q12891	473 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	NNAT	Q16517	81 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	IQCC	Q4KMZ1	466 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	SLC35F1	Q5T1Q4	408 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	NDUFAF5	Q5TEU4	345 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	LIPK	Q5VXJ0	399 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	ZC3H14	Q6PJT7	736 aa	Known RBP	13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	BPHL	Q86WA6	291 aa	Predicted RBP	13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	NUDT13	Q86X67	352 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	SH3YL1	Q96HL8	342 aa	Predicted RBP	13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	MTIF3	Q9H2K0	278 aa	Known RBP	13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	MAN2B2	Q9Y2E5	1009 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	HCN4	Q9Y3Q4	1203 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	SZT2	Q5T011	3432 aa		13.71	□□□□□ -0.21
SREBF1-205	ENST00000395757	EFCAB14	O75071	495 aa		13.71	□□□□□ -0.22
SREBF1-205	ENST00000395757	CDC123	O75794	336 aa	Predicted RBP	13.71	□□□□□ -0.22
SREBF1-205	ENST00000395757	RPN2	P04844	631 aa		13.71	□□□□□ -0.22
SREBF1-205	ENST00000395757	ANXA8	P13928	327 aa		13.71	□□□□□ -0.22
SREBF1-205	ENST00000395757	TGM4	P49221	684 aa		13.71	□□□□□ -0.22
SREBF1-205	ENST00000395757	GPR19	Q15760	415 aa		13.71	□□□□□ -0.22
SREBF1-205	ENST00000395757	RNASE12	Q5GAN4	147 aa	Known RBP	13.71	□□□□□ -0.22
SREBF1-205	ENST00000395757	WDR45B	Q5MNZ6	344 aa		13.71	□□□□□ -0.22
SREBF1-205	ENST00000395757	DEPDC4	Q8N2C3	294 aa		13.71	□□□□□ -0.22
SREBF1-205	ENST00000395757	B3GNT7	Q8NFL0	401 aa		13.71	□□□□□ -0.22
SREBF1-205	ENST00000395757	OR52N2	Q8NGI0	321 aa		13.71	□□□□□ -0.22
SREBF1-205	ENST00000395757	CHTF18	Q8WVB6	975 aa		13.71	□□□□□ -0.22
SREBF1-205	ENST00000395757	TANK	Q92844	425 aa		13.71	□□□□□ -0.22
SREBF1-205	ENST00000395757	HHIPL1	Q96JK4	782 aa		13.71	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms