RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 TLN1Q9Y490 2541 aaKnown RBP18.62■□□□□ 0.57
SNCA-203ENST00000394986 GNG14A0A1W2PPG7 69 aa18.62■□□□□ 0.57
SNCA-203ENST00000394986 SLC28A1O00337 649 aa18.62■□□□□ 0.57
SNCA-203ENST00000394986 C1QL1O75973 258 aa18.62■□□□□ 0.57
SNCA-203ENST00000394986 SFTPCP11686 197 aa18.62■□□□□ 0.57
SNCA-203ENST00000394986 GRK2P25098 689 aa18.62■□□□□ 0.57
SNCA-203ENST00000394986 IGLV3-21P80748 117 aaPredicted RBP18.62■□□□□ 0.57
SNCA-203ENST00000394986 NFATC3Q12968 1075 aa18.62■□□□□ 0.57
SNCA-203ENST00000394986 NR6A1Q15406 480 aa18.62■□□□□ 0.57
SNCA-203ENST00000394986 VWA5B1Q5TIE3 1220 aa18.62■□□□□ 0.57
SNCA-203ENST00000394986 IRAK1BP1Q5VVH5 260 aa18.62■□□□□ 0.57
SNCA-203ENST00000394986 B3GNTL1Q67FW5 361 aaPredicted RBP18.62■□□□□ 0.57
SNCA-203ENST00000394986 OR52E8Q6IFG1 317 aa18.62■□□□□ 0.57
SNCA-203ENST00000394986 DGAT2L6Q6ZPD8 337 aa18.62■□□□□ 0.57
SNCA-203ENST00000394986 KIF2BQ8N4N8 673 aa18.62■□□□□ 0.57
SNCA-203ENST00000394986 NFAM1Q8NET5 270 aaPredicted RBP18.62■□□□□ 0.57
SNCA-203ENST00000394986 DNAJB14Q8TBM8 379 aa18.62■□□□□ 0.57
SNCA-203ENST00000394986 DOK4Q8TEW6 326 aa18.62■□□□□ 0.57
SNCA-203ENST00000394986 TANKQ92844 425 aa18.62■□□□□ 0.57
SNCA-203ENST00000394986 PPWD1Q96BP3 646 aaKnown RBP18.62■□□□□ 0.57
SNCA-203ENST00000394986 SMAD5Q99717 465 aaKnown RBP18.62■□□□□ 0.57
SNCA-203ENST00000394986 ADAP2Q9NPF8 381 aa18.62■□□□□ 0.57
SNCA-203ENST00000394986 PTGFRNQ9P2B2 879 aa18.62■□□□□ 0.57
SNCA-203ENST00000394986 RGS14O43566 566 aa18.61■□□□□ 0.57
SNCA-203ENST00000394986 JUNP05412 331 aaKnown RBP18.61■□□□□ 0.57
SNCA-203ENST00000394986 IL3P08700 152 aa18.61■□□□□ 0.57
SNCA-203ENST00000394986 ANXA4P09525 319 aaPredicted RBP18.61■□□□□ 0.57
SNCA-203ENST00000394986 TAS2R50P59544 299 aa18.61■□□□□ 0.57
SNCA-203ENST00000394986 ELAVL1Q15717 326 aaKnown RBP18.61■□□□□ 0.57
SNCA-203ENST00000394986 EXT1Q16394 746 aa18.61■□□□□ 0.57
SNCA-203ENST00000394986 LINC00696Q6ZRV3 163 aa18.61■□□□□ 0.57
SNCA-203ENST00000394986 RNF165Q6ZSG1 346 aa18.61■□□□□ 0.57
SNCA-203ENST00000394986 CDC26Q8NHZ8 85 aa18.61■□□□□ 0.57
SNCA-203ENST00000394986 M1APQ8TC57 530 aa18.61■□□□□ 0.57
SNCA-203ENST00000394986 C3orf30Q96M34 536 aa18.61■□□□□ 0.57
SNCA-203ENST00000394986 VTI1BQ9UEU0 232 aa18.61■□□□□ 0.57
SNCA-203ENST00000394986 PCDHA9Q9Y5H5 950 aa18.61■□□□□ 0.57
SNCA-203ENST00000394986 KALRNO60229 2985 aa18.61■□□□□ 0.57
SNCA-203ENST00000394986 A8MUI8 341 aa18.6■□□□□ 0.57
SNCA-203ENST00000394986 HMGB1P1B2RPK0 211 aaPredicted RBP18.6■□□□□ 0.57
SNCA-203ENST00000394986 SEC22BO75396 215 aa18.6■□□□□ 0.57
SNCA-203ENST00000394986 GPR75O95800 540 aa18.6■□□□□ 0.57
SNCA-203ENST00000394986 ICAM2P13598 275 aa18.6■□□□□ 0.57
SNCA-203ENST00000394986 ALDH9A1P49189 494 aa18.6■□□□□ 0.57
SNCA-203ENST00000394986 SERTAD2Q14140 314 aa18.6■□□□□ 0.57
SNCA-203ENST00000394986 PDCD2Q16342 344 aaPredicted RBP18.6■□□□□ 0.57
SNCA-203ENST00000394986 ZNF750Q32MQ0 723 aa18.6■□□□□ 0.57
SNCA-203ENST00000394986 GALNTL6Q49A17 601 aa18.6■□□□□ 0.57
SNCA-203ENST00000394986 AGAP7PQ5VUJ5 663 aa18.6■□□□□ 0.57
SNCA-203ENST00000394986 FCRLBQ6BAA4 426 aa18.6■□□□□ 0.57
SNCA-203ENST00000394986 FAM180BQ6P0A1 224 aa18.6■□□□□ 0.57
SNCA-203ENST00000394986 GALNT18Q6P9A2 607 aa18.6■□□□□ 0.57
SNCA-203ENST00000394986 C16orf78Q8WTQ4 265 aa18.6■□□□□ 0.57
SNCA-203ENST00000394986 PTPMT1Q8WUK0 201 aaPredicted RBP18.6■□□□□ 0.57
SNCA-203ENST00000394986 AGAP4Q96P64 663 aa18.6■□□□□ 0.57
SNCA-203ENST00000394986 LRTM1Q9HBL6 345 aa18.6■□□□□ 0.57
SNCA-203ENST00000394986 MMP25Q9NPA2 562 aa18.6■□□□□ 0.57
SNCA-203ENST00000394986 C1orf109Q9NX04 203 aa18.6■□□□□ 0.57
SNCA-203ENST00000394986 HEY2Q9UBP5 337 aa18.6■□□□□ 0.57
SNCA-203ENST00000394986 DLGAP4Q9Y2H0 992 aa18.6■□□□□ 0.57
SNCA-203ENST00000394986 RAP2CQ9Y3L5 183 aa18.6■□□□□ 0.57
SNCA-203ENST00000394986 ATP6AP2A0A1C7CYW4 349 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 EIF4E1BA6NMX2 242 aaKnown RBP18.59■□□□□ 0.57
SNCA-203ENST00000394986 C17orf105B2RV13 164 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 LSM1O15116 133 aaKnown RBP18.59■□□□□ 0.57
SNCA-203ENST00000394986 GUCY1B2O75343 617 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 ATP6AP2O75787 350 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 TNNI3P19429 210 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 PRPH2P23942 346 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 SOX11P35716 441 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 STT3AP46977 705 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 CD97P48960 835 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 ST13P50502 369 aaKnown RBP18.59■□□□□ 0.57
SNCA-203ENST00000394986 TRA2BP62995 288 aaKnown RBP18.59■□□□□ 0.57
SNCA-203ENST00000394986 RPL38P63173 70 aaKnown RBP18.59■□□□□ 0.57
SNCA-203ENST00000394986 KIAA0040Q15053 153 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 XKR7Q5GH72 579 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 NOXRED1Q6NXP6 359 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 ZNF321PQ8N8H1 164 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 B3GNT7Q8NFL0 401 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 NCLNQ969V3 563 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 PPP1R36Q96LQ0 422 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 DGAT2Q96PD7 388 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 ILKAPQ9H0C8 392 aaPredicted RBP18.59■□□□□ 0.57
SNCA-203ENST00000394986 KCNK13Q9HB14 408 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 PNPOQ9NVS9 261 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 SIRT5Q9NXA8 310 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 ZNF223Q9UK11 482 aaPredicted RBP18.59■□□□□ 0.57
SNCA-203ENST00000394986 CES1P1Q9UKY3 287 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 ZNF451Q9Y4E5 1061 aa18.59■□□□□ 0.57
SNCA-203ENST00000394986 BSNQ9UPA5 3926 aa18.58■□□□□ 0.57
SNCA-203ENST00000394986 C1orf226A1L170 272 aa18.58■□□□□ 0.57
SNCA-203ENST00000394986 NPIPB8E9PQR5 432 aa18.58■□□□□ 0.57
SNCA-203ENST00000394986 MAN1A2O60476 641 aa18.58■□□□□ 0.57
SNCA-203ENST00000394986 ALPPP05187 535 aa18.58■□□□□ 0.57
SNCA-203ENST00000394986 ALOX15P16050 662 aaPredicted RBP18.58■□□□□ 0.57
SNCA-203ENST00000394986 TACR1P25103 407 aa18.58■□□□□ 0.57
SNCA-203ENST00000394986 ZNF763Q0D2J5 394 aa18.58■□□□□ 0.57
SNCA-203ENST00000394986 RFTN2Q52LD8 501 aaPredicted RBP18.58■□□□□ 0.57
SNCA-203ENST00000394986 JMJD6Q6NYC1 403 aaPredicted RBP18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms