RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 EXOSC4Q9NPD3 245 aaKnown RBP17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 ASAH2Q9NR71 780 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 GULP1Q9UBP9 304 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 REV1Q9UBZ9 1251 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 CLEC2DQ9UHP7 191 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 HCFC2Q9Y5Z7 792 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 FAM47E-STBD1D6RA91 191 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 TLR4O00206 839 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 KRT75O95678 551 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 IGFBP1P08833 259 aaPredicted RBP17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 FEN1P39748 380 aaKnown RBP17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 SOX3P41225 446 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 NTHL1P78549 312 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 ZNF284Q2VY69 593 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 ARSIQ5FYB1 569 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 VANGL1Q8TAA9 524 aaPredicted RBP17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 NKX2-4Q9H2Z4 354 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 NFKBIL1Q9UBC1 381 aaPredicted RBP17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 DYRK1BQ9Y463 629 aa17.47■□□□□ 0.39
PCDHA1-202ENST00000394633 NUP210Q8TEM1 1887 aaPredicted RBP17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 CSO75390 466 aaKnown RBP17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 IL3P08700 152 aa17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 CSTF2P33240 577 aaKnown RBP eCLIP17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 NDUFA5Q16718 116 aa17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 RPS26P11Q5JNZ5 115 aaPredicted RBP17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 SLX4IPQ5VYV7 408 aa17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 NXNL2Q5VZ03 156 aa17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 FAM180BQ6P0A1 224 aa17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 WDR53Q7Z5U6 358 aaPredicted RBP17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 NRARPQ7Z6K4 114 aa17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 TECPR1Q7Z6L1 1165 aa17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 UBQLNLQ8IYU4 475 aa17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 ST13P5Q8NFI4 369 aaPredicted RBP17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 OR6F1Q8NGZ6 308 aa17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 ASB15Q8WXK1 588 aa17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 NEDD4LQ96PU5 975 aa17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 EFCAB11Q9BUY7 163 aa17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 RSPO3Q9BXY4 272 aaPredicted RBP17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 SLC46A2Q9BY10 475 aa17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 NPAP1Q9NZP6 1156 aa17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 DNAJC27Q9NZQ0 273 aa17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 CCL26Q9Y258 94 aa17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 WBP11Q9Y2W2 641 aaKnown RBP17.46■□□□□ 0.39
PCDHA1-202ENST00000394633 LRRK1Q38SD2 2015 aa17.46■□□□□ 0.38
PCDHA1-202ENST00000394633 NEDD8-MDP1E9PL57 170 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 RGS13O14921 159 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 CYP7B1O75881 506 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 RECQLP46063 649 aaPredicted RBP17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 HTR3AP46098 478 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 SNRPGP62308 76 aaKnown RBP17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 SEC23BQ15437 767 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 MMAAQ8IVH4 418 aaKnown RBP17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 CACTIN-AS1Q8N1I8 211 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 TP53INP1Q96A56 240 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 MTERF3Q96E29 417 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 TRMT61AQ96FX7 289 aaKnown RBP17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 SORBS1Q9BX66 1292 aaKnown RBP17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 SLC6A16Q9GZN6 736 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 CXorf36Q9H7Y0 433 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 DYRK4Q9NR20 520 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 TAAR2Q9P1P5 351 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 V9GYH0 126 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 AP3D1O14617 1153 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 CAPN5O15484 640 aaPredicted RBP17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 MOSPD3O75425 235 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 SOX14O95416 240 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 ADAP00813 363 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 OSMP13725 252 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 ENDOUP21128 410 aaKnown RBP17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 OPRD1P41143 372 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 ZNF658BQ4V348 819 aaPredicted RBP17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 REEP3Q6NUK4 255 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 ZNF544Q6NX49 715 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 ADIPOR2Q86V24 386 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 ZNF740Q8NDX6 193 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 GPR151Q8TDV0 419 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 PDXPQ96GD0 296 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 GDF15Q99988 308 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 SGPP1Q9BX95 441 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 UCK2Q9BZX2 261 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 MUTYHQ9UIF7 546 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 ZNF221Q9UK13 617 aa17.45■□□□□ 0.38
PCDHA1-202ENST00000394633 RGS5O15539 181 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 SEMA7AO75326 666 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 KRT8P05787 483 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 UQCRC2P22695 453 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 CRYBB2P43320 205 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 MAPK9P45984 424 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 RPS26P62854 115 aaKnown RBP17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 GPR50Q13585 617 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 POM121L1PQ3SYA9 428 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 ZMAT1Q5H9K5 638 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 TMEM201Q5SNT2 666 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 ATAD3CQ5T2N8 411 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 UTS2BQ765I0 119 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 KRT73Q86Y46 540 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 SLC30A8Q8IWU4 369 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 SLC34A3Q8N130 599 aa17.44■□□□□ 0.38
PCDHA1-202ENST00000394633 ZNF513Q8N8E2 541 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms