RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 INAVAQ3KP66 663 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 KBTBD6Q86V97 674 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 MON1AQ86VX9 555 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 TMEM234Q8WY98 164 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 SLAMF9Q96A28 289 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 CORO1BQ9BR76 489 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 PDGFDQ9GZP0 370 aaPredicted RBP12.93□□□□□ -0.34
USP49-203ENST00000394253 TMEM134Q9H6X4 195 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 Q9N2J8 555 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 ZCCHC3Q9NUD5 404 aaKnown RBP12.93□□□□□ -0.34
USP49-203ENST00000394253 NUP153P49790 1475 aaKnown RBP12.93□□□□□ -0.34
USP49-203ENST00000394253 P2RX6O15547 441 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 CDK14O94921 469 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 ETV6P41212 452 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 UBE2KP61086 200 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 SCAPQ12770 1279 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 UGCGQ16739 394 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 FAM69AQ5T7M9 428 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 RBCK1Q9BYM8 510 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 TMPRSS5Q9H3S3 457 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 FBRSQ9HAH7 460 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 UNC13BO14795 1591 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 GPR137BO60478 399 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 ZNF585AQ6P3V2 769 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 CFAP77Q6ZQR2 320 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 PAQR8Q8TEZ7 354 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 TAAR1Q96RJ0 339 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 SLC6A5Q9Y345 797 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 NPFFR2Q9Y5X5 522 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 TRBC2A0A5B9 178 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 RANP62826 216 aaKnown RBP12.93□□□□□ -0.34
USP49-203ENST00000394253 MRPS5P82675 430 aaKnown RBP12.93□□□□□ -0.34
USP49-203ENST00000394253 GAREM2Q75VX8 874 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 OR10T2Q8NGX3 314 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 ELMOD3Q96FG2 381 aa12.93□□□□□ -0.34
USP49-203ENST00000394253 A0A1W2PPL8 197 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 A0A1W2PPV4 95 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 IQCF5A8MTL0 148 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 PQBP1O60828 265 aaKnown RBP12.92□□□□□ -0.34
USP49-203ENST00000394253 NSA2O95478 260 aaKnown RBP12.92□□□□□ -0.34
USP49-203ENST00000394253 BCHEP06276 602 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 CLVS2Q5SYC1 327 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 OR56B4Q8NH76 319 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 OR1S1Q8NH92 325 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 FAM46BQ96A09 425 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 FAM170BA6NMN3 283 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 EEF1E1-BLOC1S5C9J1V9 151 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 NPIPA2E9PIF3 369 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 NPIPA3F8WFD2 350 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 H0Y8G0 127 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 TRAPPC6AO75865 159 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 RASAL1O95294 804 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 HBE1P02100 147 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 AVPI1Q5T686 147 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 AADACL2Q6P093 401 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 C7orf57Q8NEG2 295 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 UHRF2Q96PU4 802 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 CNN2Q99439 309 aaKnown RBP12.92□□□□□ -0.34
USP49-203ENST00000394253 DKKL1Q9UK85 242 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 A0A087WUU8 490 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.92□□□□□ -0.34
USP49-203ENST00000394253 TO15178 435 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 YY2O15391 372 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 NDUFS4O43181 175 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 ZNF43P17038 809 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 BTN1A1Q13410 526 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 KCNJ11Q14654 390 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 PHYHD1Q5SRE7 291 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 WSCD1Q658N2 575 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 SLC2A7Q6PXP3 512 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 OR6N1Q8NGY5 312 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 GNPDA2Q8TDQ7 276 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 CHFRQ96EP1 664 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 NELL2Q99435 816 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 OR51I1Q9H343 314 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 NMUR1Q9HB89 426 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 ZGRF1Q86YA3 2104 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 PREX2Q70Z35 1606 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 FFAR2O15552 330 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 PROS1P07225 676 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 TFPTP0C1Z6 253 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 NDUFS1P28331 727 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 GK3PQ14409 553 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 TAF1AQ15573 450 aaPredicted RBP12.92□□□□□ -0.34
USP49-203ENST00000394253 LSMEM2Q8N112 164 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 PORCNQ9H237 461 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 SLX4Q8IY92 1834 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 CAPN15O75808 1086 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 TLE4Q04727 773 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 EPHA10Q5JZY3 1008 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 RSPRY1Q96DX4 576 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 TGIF2Q9GZN2 237 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 LHX5Q9H2C1 402 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 HAO2Q9NYQ3 351 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 IL20RAQ9UHF4 553 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 UTS2RQ9UKP6 389 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 AMY2AP04746 511 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 PGM5Q15124 567 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 SLC36A3Q495N2 470 aa12.92□□□□□ -0.34
USP49-203ENST00000394253 CDC42EP5Q6NZY7 148 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms