RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 CPSF4O95639 269 aaKnown RBP12.82□□□□□ -0.36
PTN-202ENST00000393083 GSNP06396 782 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 ZNF888P0CJ79 500 aaPredicted RBP12.82□□□□□ -0.36
PTN-202ENST00000393083 HOXB9P17482 250 aaPredicted RBP12.82□□□□□ -0.36
PTN-202ENST00000393083 DDCP20711 480 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 HIST1H1TP22492 207 aaPredicted RBP12.82□□□□□ -0.36
PTN-202ENST00000393083 ATP5A1P25705 553 aaKnown RBP12.82□□□□□ -0.36
PTN-202ENST00000393083 CERS1P27544 350 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 TSFMP43897 325 aaKnown RBP12.82□□□□□ -0.36
PTN-202ENST00000393083 TRPC1P48995 793 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 ALDH9A1P49189 494 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 GSK3BP49841 420 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 ARF3P61204 181 aaPredicted RBP12.82□□□□□ -0.36
PTN-202ENST00000393083 TRA2BP62995 288 aaKnown RBP12.82□□□□□ -0.36
PTN-202ENST00000393083 MS4A2Q01362 244 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 BNIP2Q12982 314 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 TRIM25Q14258 630 aaKnown RBP12.82□□□□□ -0.36
PTN-202ENST00000393083 HEPACAMQ14CZ8 416 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 RCN1Q15293 331 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 GPR19Q15760 415 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 TMTC4Q5T4D3 741 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 TMEM164Q5U3C3 297 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 CEACAM20Q6UY09 585 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 TICAM1Q8IUC6 712 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 OR4N4Q8N0Y3 316 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 DNAJC22Q8N4W6 341 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 VPS37AQ8NEZ2 397 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 BHLHE22Q8NFJ8 381 aaPredicted RBP12.82□□□□□ -0.36
PTN-202ENST00000393083 SNIP1Q8TAD8 396 aaKnown RBP12.82□□□□□ -0.36
PTN-202ENST00000393083 ZCCHC14Q8WYQ9 949 aaKnown RBP12.82□□□□□ -0.36
PTN-202ENST00000393083 CCDC115Q96NT0 180 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 GBP5Q96PP8 586 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 KCTD14Q9BQ13 255 aaPredicted RBP12.82□□□□□ -0.36
PTN-202ENST00000393083 CPPED1Q9BRF8 314 aaPredicted RBP12.82□□□□□ -0.36
PTN-202ENST00000393083 ZPBPQ9BS86 351 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 PCDHAC1Q9H158 963 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 RNPEPL1Q9HAU8 725 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 PRDM7Q9NQW5 492 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 SLC6A13Q9NSD5 602 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 TEX10Q9NXF1 929 aaPredicted RBP12.82□□□□□ -0.36
PTN-202ENST00000393083 BTNL2Q9UIR0 455 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 PCDHB14Q9Y5E9 798 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 TPRP12270 2363 aaKnown RBP12.82□□□□□ -0.36
PTN-202ENST00000393083 APC2O95996 2303 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 DMXL2Q8TDJ6 3036 aa12.82□□□□□ -0.36
PTN-202ENST00000393083 PRSS51A0A1B0GVH4 220 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 URADA6NGE7 173 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 RNASET2O00584 256 aaKnown RBP12.81□□□□□ -0.36
PTN-202ENST00000393083 ACOT8O14734 319 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 DNAJA2O60884 412 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 STAMBPO95630 424 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 EIF2S1P05198 315 aaKnown RBP12.81□□□□□ -0.36
PTN-202ENST00000393083 FAM58BPP0C7Q3 252 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 DDX5P17844 614 aaKnown RBP12.81□□□□□ -0.36
PTN-202ENST00000393083 PTPN6P29350 595 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 LRRC74AQ0VAA2 488 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 TRAP1Q12931 704 aaKnown RBP12.81□□□□□ -0.36
PTN-202ENST00000393083 DEFB110Q30KQ9 67 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 RUNDC3AQ59EK9 446 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 BPHLQ86WA6 291 aaPredicted RBP12.81□□□□□ -0.36
PTN-202ENST00000393083 IFNEQ86WN2 208 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 PROSER1Q86XN7 944 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 ZCCHC7Q8N3Z6 543 aaKnown RBP12.81□□□□□ -0.36
PTN-202ENST00000393083 ZNF655Q8N720 491 aaPredicted RBP12.81□□□□□ -0.36
PTN-202ENST00000393083 ACOT4Q8N9L9 421 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 SLC26A7Q8TE54 656 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 UTP15Q8TED0 518 aaKnown RBP12.81□□□□□ -0.36
PTN-202ENST00000393083 CIDECQ96AQ7 238 aaPredicted RBP12.81□□□□□ -0.36
PTN-202ENST00000393083 SH3GL1Q99961 368 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 DCLRE1BQ9H816 532 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 RARRES3Q9UL19 164 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 SCN2AQ99250 2005 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.81□□□□□ -0.36
PTN-202ENST00000393083 H3BMH7 237 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 TBX19O60806 448 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 FKBP6O75344 327 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 SCELO95171 688 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 TIAF1O95411 115 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 CD82P27701 267 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 VSX2P58304 361 aaPredicted RBP12.81□□□□□ -0.36
PTN-202ENST00000393083 BTN3A2P78410 334 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 SLAMF1Q13291 335 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 SLC9A5Q14940 896 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 PRSS53Q2L4Q9 553 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.81□□□□□ -0.36
PTN-202ENST00000393083 PWWP2BQ6NUJ5 590 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 PPP1R3BQ86XI6 285 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 CSNK1A1LQ8N752 337 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 FAM47BQ8NA70 645 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 OR4A15Q8NGL6 344 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 OR1L3Q8NH93 324 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 AURKBQ96GD4 344 aaPredicted RBP12.81□□□□□ -0.36
PTN-202ENST00000393083 ECSITQ9BQ95 431 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 THUMPD3Q9BV44 507 aaKnown RBP12.81□□□□□ -0.36
PTN-202ENST00000393083 FAIM2Q9BWQ8 316 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 IKZF5Q9H5V7 419 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 LYARQ9NX58 379 aaKnown RBP12.81□□□□□ -0.36
PTN-202ENST00000393083 VPS4AQ9UN37 437 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 AP3M1Q9Y2T2 418 aa12.81□□□□□ -0.36
PTN-202ENST00000393083 GUCY1B2O75343 617 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms