RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 FAM32AQ9Y421 112 aaKnown RBP24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 PCDHGA10Q9Y5H3 936 aa24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 HEBP2Q9Y5Z4 205 aa24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 SNRNP200O75643 2136 aaKnown RBP24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 SZT2Q5T011 3432 aa24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 AXIN1O15169 862 aa24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 FAM20BO75063 409 aa24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 CD6P30203 668 aa24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 LIMS1P48059 325 aa24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 PUM1Q14671 1186 aaKnown RBP eCLIP24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 ENPP7Q6UWV6 458 aa24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 OR8K5Q8NH50 307 aa24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 FKBP10Q96AY3 582 aa24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 AMDHD1Q96NU7 426 aa24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 NIPSNAP1Q9BPW8 284 aa24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 FUNDC2Q9BWH2 189 aa24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 FAIM2Q9BWQ8 316 aa24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 SYNPO2LQ9H987 977 aa24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 SLC35C2Q9NQQ7 365 aa24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 EHD3Q9NZN3 535 aa24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 NCKAP1Q9Y2A7 1128 aa24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 POFUT2Q9Y2G5 429 aa24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 COLEC10Q9Y6Z7 277 aa24.27■■□□□ 1.48
SMARCD3-203ENST00000392811 ZNF99A8MXY4 864 aaPredicted RBP24.26■■□□□ 1.47
SMARCD3-203ENST00000392811 H0Y8X5 98 aa24.26■■□□□ 1.47
SMARCD3-203ENST00000392811 PCDH17O14917 1159 aa24.26■■□□□ 1.47
SMARCD3-203ENST00000392811 IFNW1P05000 195 aa24.26■■□□□ 1.47
SMARCD3-203ENST00000392811 HOXC4P09017 264 aaPredicted RBP24.26■■□□□ 1.47
SMARCD3-203ENST00000392811 HTR1BP28222 390 aa24.26■■□□□ 1.47
SMARCD3-203ENST00000392811 AHRP35869 848 aa24.26■■□□□ 1.47
SMARCD3-203ENST00000392811 GSSP48637 474 aa24.26■■□□□ 1.47
SMARCD3-203ENST00000392811 SLAMF1Q13291 335 aa24.26■■□□□ 1.47
SMARCD3-203ENST00000392811 GANABQ14697 944 aaKnown RBP24.26■■□□□ 1.47
SMARCD3-203ENST00000392811 SLC9A5Q14940 896 aa24.26■■□□□ 1.47
SMARCD3-203ENST00000392811 ABHD17CQ6PCB6 329 aa24.26■■□□□ 1.47
SMARCD3-203ENST00000392811 ZNF540Q8NDQ6 660 aa24.26■■□□□ 1.47
SMARCD3-203ENST00000392811 OR9Q2Q8NGE9 314 aa24.26■■□□□ 1.47
SMARCD3-203ENST00000392811 APOBEC4Q8WW27 367 aaKnown RBP24.26■■□□□ 1.47
SMARCD3-203ENST00000392811 PRDM7Q9NQW5 492 aa24.26■■□□□ 1.47
SMARCD3-203ENST00000392811 RNF6Q9Y252 685 aa24.26■■□□□ 1.47
SMARCD3-203ENST00000392811 PCDHGA2Q9Y5H1 932 aa24.26■■□□□ 1.47
SMARCD3-203ENST00000392811 GLOD5A6NK44 160 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 ANHXE9PGG2 379 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 VIPP01282 170 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 RHCEP18577 417 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 HIST1H1TP22492 207 aaPredicted RBP24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 AK4P27144 223 aaPredicted RBP24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 CMPK1P30085 196 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 MAP2K4P45985 399 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 PXNP49023 591 aaPredicted RBP24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 HMGA2P52926 109 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 HPCAP84074 193 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 KCNC4Q03721 635 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 DCTN2Q13561 401 aaKnown RBP24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 TOR1AIP1Q5JTV8 583 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 TPRG1LQ5T0D9 272 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 USP30Q70CQ3 517 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 THAP11Q96EK4 314 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 RSPO3Q9BXY4 272 aaPredicted RBP24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 GPN2Q9H9Y4 310 aaPredicted RBP24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 ASB4Q9Y574 426 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 MYO10Q9HD67 2058 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 MAN2B1O00754 1011 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 NDUFS2O75306 463 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 MFN2O95140 757 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 GADD45GO95257 159 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 CD72P21854 359 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 GGT2P36268 569 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 RD3Q7Z3Z2 195 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 TBC1D19Q8N5T2 526 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 ACOT4Q8N9L9 421 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 GPR32P1Q8NGA4 272 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 OR4E2Q8NGC2 313 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 DTNBP1Q96EV8 351 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 MRGPRX1Q96LB2 322 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 SARGQ9BW04 601 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 CLDND1Q9NY35 253 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 RHCGQ9UBD6 479 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 PSME2Q9UL46 239 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 PCDHGA4Q9Y5G9 962 aa24.25■■□□□ 1.47
SMARCD3-203ENST00000392811 A8MVJ9 347 aa24.24■■□□□ 1.47
SMARCD3-203ENST00000392811 ISM1B1AKI9 464 aa24.24■■□□□ 1.47
SMARCD3-203ENST00000392811 KDM1AO60341 852 aa24.24■■□□□ 1.47
SMARCD3-203ENST00000392811 MAN1A2O60476 641 aa24.24■■□□□ 1.47
SMARCD3-203ENST00000392811 ZNF182P17025 639 aaPredicted RBP24.24■■□□□ 1.47
SMARCD3-203ENST00000392811 ATP5A1P25705 553 aaKnown RBP24.24■■□□□ 1.47
SMARCD3-203ENST00000392811 GPC1P35052 558 aa24.24■■□□□ 1.47
SMARCD3-203ENST00000392811 NFATC4Q14934 902 aa24.24■■□□□ 1.47
SMARCD3-203ENST00000392811 ZNF425Q6IV72 752 aa24.24■■□□□ 1.47
SMARCD3-203ENST00000392811 SLC16A12Q6ZSM3 486 aa24.24■■□□□ 1.47
SMARCD3-203ENST00000392811 SZRD1Q7Z422 152 aa24.24■■□□□ 1.47
SMARCD3-203ENST00000392811 AMIGO1Q86WK6 493 aa24.24■■□□□ 1.47
SMARCD3-203ENST00000392811 OR2L5Q8NG80 312 aa24.24■■□□□ 1.47
SMARCD3-203ENST00000392811 LCN9Q8WX39 176 aa24.24■■□□□ 1.47
SMARCD3-203ENST00000392811 ATG4BQ9Y4P1 393 aa24.24■■□□□ 1.47
SMARCD3-203ENST00000392811 A0A1W2PR48 441 aa24.23■■□□□ 1.47
SMARCD3-203ENST00000392811 RGS10O43665 173 aa24.23■■□□□ 1.47
SMARCD3-203ENST00000392811 FOXD2O60548 495 aaPredicted RBP24.23■■□□□ 1.47
SMARCD3-203ENST00000392811 MT-ND2P03891 347 aa24.23■■□□□ 1.47
SMARCD3-203ENST00000392811 CHRM5P08912 532 aaPredicted RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms