RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 C1orf189Q5VU69 101 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 PRAMEF8Q5VWM4 474 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 NEPROQ6NW34 567 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 EMBQ6PCB8 327 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 ZNF730Q6ZMV8 503 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 TIPARPQ7Z3E1 657 aaKnown RBP1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 SH2D6Q7Z4S9 175 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 SLC25A42Q86VD7 318 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 SLC47A2Q86VL8 602 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 CDC20BQ86Y33 519 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 MARCH9Q86YJ5 346 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 CCDC170Q8IYT3 715 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 FGFRL1Q8N441 504 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 GVQW1Q8N7I0 195 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 POM121L12Q8N7R1 296 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 ZNF781Q8N8C0 355 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 SIDT2Q8NBJ9 832 aaKnown RBP1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 CCDC197Q8NCU1 140 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 LPCAT1Q8NF37 534 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 BEST4Q8NFU0 473 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 PSMA8Q8TAA3 256 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 BCL2L2Q92843 193 aaPredicted RBP1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 FAM46BQ96A09 425 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 C5orf30Q96GV9 206 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 PCED1BQ96HM7 432 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 RAB40CQ96S21 281 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 SPAG8Q99932 426 aaPredicted RBP1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 AGPAT1Q99943 283 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 HSD17B14Q9BPX1 270 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 DDX50Q9BQ39 737 aaKnown RBP1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 CCDC28BQ9BUN5 200 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 NTMT1Q9BV86 223 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 NUSAP1Q9BXS6 441 aaKnown RBP1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 CACNG6Q9BXT2 260 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 PUS3Q9BZE2 481 aaKnown RBP1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 OSBPL8Q9BZF1 889 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 TSPYL1Q9H0U9 437 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 ALDH8A1Q9H2A2 487 aaPredicted RBP1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 NT5DC2Q9H857 520 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 RPS10P5Q9NQ39 176 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 GDF3Q9NR23 364 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 PNPLA3Q9NST1 481 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 FAM212BQ9NTI7 297 aaPredicted RBP1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 TSPAN16Q9UKR8 245 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 FBXW2Q9UKT8 454 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 MGAT4AQ9UM21 535 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 SPATA2Q9UM82 520 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 EXOC7Q9UPT5 735 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 FOXA2Q9Y261 457 aaPredicted RBP1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 EXOC6BQ9Y2D4 811 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 CPQQ9Y646 472 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 SMAD5-AS1Q9Y6J3 95 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 STYXL1Q9Y6J8 313 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 RAD54L2Q9Y4B4 1467 aa1.34□□□□□ -2.19
RNU6-440P-201ENST00000390882 SALL1Q9NSC2 1324 aa1.34□□□□□ -2.2
RNU6-440P-201ENST00000390882 IGHV3-16A0A0C4DH30 117 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 LOC390937A0A1W2PQ73 354 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 YJEFN3A6XGL0 299 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 ZNF724A8MTY0 619 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 SHISA9B4DS77 424 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 CHEK1O14757 476 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 GPRIN2O60269 458 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 FRAT2O75474 233 aaPredicted RBP1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 GMNNO75496 209 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 GOSR1O95249 250 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 SEMA4FO95754 770 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 TXNDC12O95881 172 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 HPP00738 406 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 CHRNGP07510 517 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 NUDT17P0C025 328 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 SBK2P0C263 348 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 CT45A8P0DMV1 189 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 CT45A9P0DMV2 189 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 B4GALT1P15291 398 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 EZRP15311 586 aaKnown RBP1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 GPX3P22352 226 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 ID1P41134 155 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 ELK3P41970 407 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 ALDH3B1P43353 468 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 RPL34P49207 117 aaKnown RBP1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 GSK3BP49841 420 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 TNFSF10P50591 281 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 UCP2P55851 309 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 KCNK10P57789 538 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 RPL27P61353 136 aaKnown RBP1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 C17orf67Q0P5P2 114 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 HSPA14Q0VDF9 509 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 SLC17A1Q14916 467 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 HEPACAMQ14CZ8 416 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 EMC2Q15006 297 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 P2RY14Q15391 338 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 ZNF674Q2M3X9 581 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 TMEM44Q2T9K0 475 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 WSCD2Q2TBF2 565 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 C15orf32Q32M92 178 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 MPPE1Q53F39 396 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 IFI44LQ53G44 452 aa1.33□□□□□ -2.2
RNU6-440P-201ENST00000390882 CT45A2Q5DJT8 189 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms