RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 BRF2Q9HAW0 419 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 SPTA1P02549 2419 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 A0A1B0GVT2 93 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 BLOC1S5-TXNDC5H3BN57 136 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 CASKO14936 926 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 TLX3O43711 291 aaPredicted RBP12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 TMCC2O75069 709 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 NADKO95544 446 aaPredicted RBP12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 PSMA1P25786 263 aaKnown RBP12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 INHBCP55103 352 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 HSF5Q4G112 596 aaPredicted RBP12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 TMEM196Q5HYL7 178 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 RSBN1Q5VWQ0 802 aaPredicted RBP12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 OGFOD2Q6N063 350 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 FRRS1Q6ZNA5 592 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 USP30Q70CQ3 517 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 MOSPD2Q8NHP6 518 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 EDAQ92838 391 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 RACGAP1Q9H0H5 632 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 ZNF624Q9P2J8 865 aaPredicted RBP12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 PLCL2Q9UPR0 1127 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 LIPT1Q9Y234 373 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 SRFP11831 508 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 CDKL1Q00532 357 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 PUS10Q3MIT2 529 aaKnown RBP12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 IQCCQ4KMZ1 466 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 RNF220Q5VTB9 566 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 ZNF433Q8N7K0 673 aaPredicted RBP12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 OR1E3Q8WZA6 343 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 CHCHD6Q9BRQ6 235 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 SDHAF3Q9NRP4 125 aa12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 TRNAU1APQ9NX07 287 aaKnown RBP12.49□□□□□ -0.41
PTPRN2-202ENST00000389416 POLR1CO15160 346 aaPredicted RBP12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 BMP8BP34820 402 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 CXXC5Q7LFL8 322 aaKnown RBP12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 BMP8AQ7Z5Y6 402 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 EID2Q8N6I1 236 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 UCK2Q9BZX2 261 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 EHD1Q9H4M9 534 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 HMG20AQ9NP66 347 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 VAPAQ9P0L0 249 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 POFUT2Q9Y2G5 429 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 ANHXE9PGG2 379 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 CLEC3AO75596 197 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 GP1BBP13224 206 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 PCYT1AP49585 367 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 ACY1Q03154 408 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 PLCXD2Q0VAA5 305 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 SYT16Q17RD7 645 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 ZC3H14Q6PJT7 736 aaKnown RBP12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 VTCN1Q7Z7D3 282 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 NAGSQ8N159 534 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 ZNF707Q96C28 371 aaPredicted RBP12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 MRGPRX1Q96LB2 322 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 LPAR4Q99677 370 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 DOHHQ9BU89 302 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 TSSK6Q9BXA6 273 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 C1QTNF1Q9BXJ1 281 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 TM9SF3Q9HD45 589 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 POT1Q9NUX5 634 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 WBP11Q9Y2W2 641 aaKnown RBP12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 HMGN1P05114 100 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 AFF3P51826 1226 aaKnown RBP12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 ZNF33BQ06732 778 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 DDI2Q5TDH0 399 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 LSMEM2Q8N112 164 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 BBS10Q8TAM1 723 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 MZB1Q8WU39 189 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 KLHL6Q8WZ60 621 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 TMEM19Q96HH6 336 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 MARCH7Q9H992 704 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 KLF15Q9UIH9 416 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 HCN4Q9Y3Q4 1203 aa12.48□□□□□ -0.41
PTPRN2-202ENST00000389416 GPR37L1O60883 481 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 LDB3O75112 727 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 H6PDO95479 791 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 ZNF823P16415 610 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 GPX3P22352 226 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 CD47Q08722 323 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 SLC35F1Q5T1Q4 408 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 RBM12BQ8IXT5 1001 aaKnown RBP12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 ECHDC3Q96DC8 303 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 CD180Q99467 661 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 ALOXE3Q9BYJ1 711 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 CD320Q9NPF0 282 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 ZC4H2Q9NQZ6 224 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 CENPXA8MT69 81 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 T-ENOLP0DO92 83 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 TACR1P25103 407 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 CDH15P55291 814 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 NANOGNBQ7Z5D8 188 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 LAPTM4BQ86VI4 370 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 OR52P1PQ8NH57 321 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 DGCR14Q96DF8 476 aaKnown RBP12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 MSANTD3Q96H12 275 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 CXorf21Q9HAI6 301 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 NLGN3Q9NZ94 848 aa12.47□□□□□ -0.41
PTPRN2-202ENST00000389416 EPHA6Q9UF33 1036 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms