RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 IFT52Q9Y366 437 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 AP1M2Q9Y6Q5 423 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 TGM5O43548 720 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 TBRG1Q3YBR2 411 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 CBLL1Q75N03 491 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 ZNF551Q7Z340 670 aaPredicted RBP15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 OR9Q2Q8NGE9 314 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 PXYLP1Q8TE99 480 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 ISG20Q96AZ6 181 aaKnown RBP15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 C5orf34Q96MH7 638 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 CDADC1Q9BWV3 514 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 GSDMCQ9BYG8 508 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 DPAGT1Q9H3H5 408 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 SLC28A3Q9HAS3 691 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 GJD2Q9UKL4 321 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 PTTG1O95997 202 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 MT-ND5P03915 603 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 FHP07954 510 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 OSMP13725 252 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 MTHFD2P13995 350 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 MLLT10P55197 1068 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 MCCD1P59942 119 aaPredicted RBP15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 PPP3R1P63098 170 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 CATSPEREQ5SY80 951 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 GTF2IRD2BQ6EKJ0 949 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.42■□□□□ 0.063e-9■■■■■ 70.2
PTPRN2-201ENST00000389413 GTF2IRD2Q86UP8 949 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 ATP6V1C2Q8NEY4 427 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 OR51G2Q8NGK0 314 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 NEIL3Q8TAT5 605 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 ECHDC3Q96DC8 303 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 CCDC32Q9BV29 185 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 ERVK13-1Q9NX77 482 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 SARDHQ9UL12 918 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 TMEM5Q9Y2B1 443 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 FKBP7Q9Y680 259 aa15.42■□□□□ 0.06
PTPRN2-201ENST00000389413 ELOA3DA6NLF2 546 aaPredicted RBP15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 CPNE3O75131 537 aaKnown RBP15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 KLHL18O94889 574 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 TACSTD2P09758 323 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 C6P13671 934 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 AOAHP28039 575 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 GGT2P36268 569 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 TAS2R43P59537 309 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 SLAMF1Q13291 335 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 ELOA3BQ3SY89 546 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 CES4AQ5XG92 561 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 C22orf42Q6IC83 251 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 GHDCQ8N2G8 530 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 SLC37A3Q8NCC5 494 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 ELOA3Q8NG57 546 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 C11orf49Q9H6J7 331 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 BRD7Q9NPI1 651 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 AASSQ9UDR5 926 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 ABCG2Q9UNQ0 655 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 GRIP1Q9Y3R0 1128 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 EMC8O43402 210 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 GMFGO60234 142 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 ITGA10O75578 1167 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 ASGR2P07307 311 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 TFPIP10646 304 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 GDI1P31150 447 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 SLC35F1Q5T1Q4 408 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 C6orf183Q5T699 404 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 IRAK1BP1Q5VVH5 260 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 C1orf216Q8TAB5 229 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 RNF31Q96EP0 1072 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 TRMT2BQ96GJ1 504 aaKnown RBP15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 CPPED1Q9BRF8 314 aaPredicted RBP15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 CPEB1Q9BZB8 566 aaKnown RBP15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 NEK6Q9HC98 313 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 TMEM30AQ9NV96 361 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 C14orf105Q9NVL8 296 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 HEMK1Q9Y5R4 338 aaPredicted RBP15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 GABRR3A8MPY1 467 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 GPM6BQ13491 265 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 APOFQ13790 326 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 PON3Q15166 354 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 NRROSQ86YC3 692 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 GID4Q8IVV7 300 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 CPXM2Q8N436 756 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 ZFP90Q8TF47 636 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 SIPA1Q96FS4 1042 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 B3GNT3Q9Y2A9 372 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 ZNF879B4DU55 563 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 MID1O15344 667 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 PAK4O96013 591 aaPredicted RBP15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 CTSOP43234 321 aaPredicted RBP15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 FPGSQ05932 587 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 SBSNQ6UWP8 590 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 LHFPL3Q86UP9 236 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 SIX5Q8N196 739 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 NUP43Q8NFH3 380 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 OR2T33Q8NG76 320 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 OR4K14Q8NGD5 310 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 NMNAT1Q9HAN9 279 aaPredicted RBP15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 PFDN2Q9UHV9 154 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 PCDHGA4Q9Y5G9 962 aa15.41■□□□□ 0.06
PTPRN2-201ENST00000389413 C1orf226A1L170 272 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms