RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 PIGVQ9NUD9 493 aa-1.25□□□□□ -2.61
RNU6-540P-201ENST00000384622 TMLHEQ9NVH6 421 aa-1.25□□□□□ -2.61
RNU6-540P-201ENST00000384622 CACNG4Q9UBN1 327 aa-1.25□□□□□ -2.61
RNU6-540P-201ENST00000384622 C19orf25Q9UFG5 118 aaPredicted RBP-1.25□□□□□ -2.61
RNU6-540P-201ENST00000384622 OR14J1Q9UGF5 321 aa-1.25□□□□□ -2.61
RNU6-540P-201ENST00000384622 TMCC3Q9ULS5 477 aa-1.25□□□□□ -2.61
RNU6-540P-201ENST00000384622 NOB1Q9ULX3 412 aaKnown RBP-1.25□□□□□ -2.61
RNU6-540P-201ENST00000384622 FARSAQ9Y285 508 aaKnown RBP-1.25□□□□□ -2.61
RNU6-540P-201ENST00000384622 TICRRQ7Z2Z1 1910 aa-1.25□□□□□ -2.61
RNU6-540P-201ENST00000384622 PARD3Q8TEW0 1356 aa-1.25□□□□□ -2.61
RNU6-540P-201ENST00000384622 NCOA6Q14686 2063 aaPredicted RBP-1.25□□□□□ -2.61
RNU6-540P-201ENST00000384622 GOLGB1Q14789 3259 aaKnown RBP-1.25□□□□□ -2.61
RNU6-540P-201ENST00000384622 ADAMTS7Q9UKP4 1686 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 CFAP65Q6ZU64 1925 aaKnown RBP-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 RAI1Q7Z5J4 1906 aaPredicted RBP-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 POM121BA6NF01 834 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 AGAP14A8MT82 685 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 FAM90A23PA8MXZ1 464 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 SNURFLB1AK76 121 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 E7EVH7 732 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 TSPAN6O43657 245 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 TIMM17BO60830 172 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 KCNK5O95279 499 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 F9P00740 461 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 HCKP08631 526 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZNF18P17022 549 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 RPL17P18621 184 aaKnown RBP-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 PTNP21246 168 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 ME2P23368 584 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 NPY1RP25929 384 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 GDI1P31150 447 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 HOXC9P31274 260 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 OR3A2P47893 321 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 GALK2Q01415 458 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 AMPD3Q01432 767 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 GCNT1Q02742 428 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 ACVR1Q04771 509 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 DMPKQ09013 629 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 IFFO1Q0D2I5 559 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 TAF11Q15544 211 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 NAB2Q15742 525 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 SLC35G1Q2M3R5 365 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 XKR7Q5GH72 579 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 ARMCX4Q5H9R4 360 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 RNF220Q5VTB9 566 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 NAA35Q5VZE5 725 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 GGT6Q6P531 493 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 UNC5DQ6UXZ4 953 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 C12orf54Q6X4T0 127 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZSCAN30Q86W11 494 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 Q8IYB0 196 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 CDK20Q8IZL9 346 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 CNTROBQ8N137 903 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZNF664Q8N3J9 261 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 NME8Q8N427 588 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 CPSF7Q8N684 471 aaKnown RBP-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZNF645Q8N7E2 425 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 SPANXA2-OT1Q8N9U9 137 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZNF555Q8NEP9 628 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 OR52N5Q8NH56 324 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 C10orf105Q8TEF2 133 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 SEPT1Q8WYJ6 367 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 RUBCNQ92622 972 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 C11orf52Q96A22 123 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 NSUN4Q96CB9 384 aaKnown RBP-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 ECHDC3Q96DC8 303 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZC2HC1AQ96GY0 325 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 ACOX2Q99424 681 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 URM1Q9BTM9 101 aaKnown RBP-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 NUP58Q9BVL2 599 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 FAM124BQ9H5Z6 455 aaPredicted RBP-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 SP140LQ9H930 580 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 LTB4R2Q9NPC1 389 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 TREX1Q9NSU2 369 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZNHIT6Q9NWK9 470 aaKnown RBP-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 SOHLH2Q9NX45 425 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 MYO1AQ9UBC5 1043 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 DHCR7Q9UBM7 475 aaKnown RBP-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 ZNF221Q9UK13 617 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 CCPG1Q9ULG6 757 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 LUC7L2Q9Y383 392 aaKnown RBP-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 CEPT1Q9Y6K0 416 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 USH1CQ9Y6N9 552 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 MBD5Q9P267 1494 aa-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 CDK13Q14004 1512 aaKnown RBP-1.26□□□□□ -2.61
RNU6-540P-201ENST00000384622 IGKV2D-26A0A0A0MRZ7 120 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 A0A1B0GUS0 222 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 LOC107986453A0A1B0GWG9 222 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 TMEM89A2RUT3 159 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 C7orf66A4D0T2 115 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 GRIFINA4D1Z8 144 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 CTAGE15A4D2H0 777 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 DPRXA6NFQ7 191 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 SPAG7O75391 227 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 MTRF1O75570 445 aaKnown RBP-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 MMP23AO75900 390 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 IGLV2-23P01705 113 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 IGLV2-8P01709 118 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 GIMD1P0DJR0 217 aa-1.27□□□□□ -2.61
RNU6-540P-201ENST00000384622 DARSP14868 501 aaKnown RBP-1.27□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms