RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 ATAD3CQ5T2N8 411 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 PLAG1Q6DJT9 500 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 FRMPD2BQ6IN97 320 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 RBM45Q8IUH3 476 aaKnown RBP15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 TAGAPQ8N103 731 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 OR6F1Q8NGZ6 308 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 GEMIN6Q8WXD5 167 aaKnown RBP15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 PPCDCQ96CD2 204 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 CDCA4Q9BXL8 241 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 SMURF1Q9HCE7 757 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 ASF1AQ9Y294 204 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 N6AMT1Q9Y5N5 214 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 OBSL1O75147 1896 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 PDZK1P1A8MUH7 402 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 TFECO14948 347 aaPredicted RBP15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 EPHX1P07099 455 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 C6P13671 934 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 LRRC74AQ0VAA2 488 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 MED27Q6P2C8 311 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 TNFAIP8L2Q6P589 184 aaPredicted RBP15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 C19orf48Q6RUI8 117 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 NLRP8Q86W28 1048 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 TAPBPLQ9BX59 468 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 BHLHE41Q9C0J9 482 aaPredicted RBP15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 GULP1Q9UBP9 304 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 CFL2Q9Y281 166 aa15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 PCYT1BQ9Y5K3 369 aaPredicted RBP15.48■□□□□ 0.07
NKX3-1-201ENST00000380871 PNMA8CA0A1B0GUJ8 204 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 SLC9A3R1O14745 358 aaPredicted RBP15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 MFN2O95140 757 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 PCDH8O95206 1070 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 CRISP1P54107 249 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 DEFA1P59665 94 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 DEFA3P59666 94 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 DPPA4Q7L190 304 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 SLC34A3Q8N130 599 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 PLA2G15Q8NCC3 412 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 ASB15Q8WXK1 588 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 TIFAQ96CG3 184 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 CRELD1Q96HD1 420 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 TM7SF3Q9NS93 570 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 MKLN1Q9UL63 735 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 F5P12259 2224 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 APOA1P02647 267 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 CA3P07451 260 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 EN2P19622 333 aaPredicted RBP15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 HTR3AP46098 478 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 RFX2P48378 723 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 RACK1P63244 317 aaKnown RBP15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 HMGN2P46Q86SG4 172 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 OR56A3Q8NH54 315 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 C16orf78Q8WTQ4 265 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 NUS1Q96E22 293 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 TRNT1Q96Q11 434 aaKnown RBP15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 ABCG4Q9H172 646 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 TIGARQ9NQ88 270 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 C5AR2Q9P296 337 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 ATP6V1HQ9UI12 483 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 ENPP4Q9Y6X5 453 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 GON4LQ3T8J9 2241 aa15.47■□□□□ 0.07
NKX3-1-201ENST00000380871 HEPACAM2A8MVW5 462 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 RFXAPO00287 272 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 ADH1CP00326 375 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 PCCBP05166 539 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 SERPIND1P05546 499 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 DDX6P26196 483 aaKnown RBP eCLIP15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 FCHO2Q0JRZ9 810 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 FAM78AQ5JUQ0 283 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 ZNF770Q6IQ21 691 aaPredicted RBP15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 LAS2Q8IYD9 372 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 ZNF707Q96C28 371 aaPredicted RBP15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 SLC6A18Q96N87 628 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 DDX28Q9NUL7 540 aaKnown RBP15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 CLN6Q9NWW5 311 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 WBP11Q9Y2W2 641 aaKnown RBP15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 V9GYH0 126 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 A0A0G2JN53 185 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 EFCAB10A6NFE3 127 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 ZNF197O14709 1029 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 CSO75390 466 aaKnown RBP15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 IL3P08700 152 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 CISD3P0C7P0 127 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 HSD3B1P14060 373 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 NPPBP16860 134 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 HSD3B2P26439 372 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 EPHA5P54756 1037 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 KCNC3Q14003 757 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 ZNF79Q15937 498 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 IQCF1Q8N6M8 205 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 RAB8BQ92930 207 aa15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 MAGEB10Q96LZ2 347 aaPredicted RBP15.46■□□□□ 0.07
NKX3-1-201ENST00000380871 SLC5A10A0PJK1 596 aa15.46■□□□□ 0.06
NKX3-1-201ENST00000380871 APOL3O95236 402 aa15.46■□□□□ 0.06
NKX3-1-201ENST00000380871 KRT8P05787 483 aa15.46■□□□□ 0.06
NKX3-1-201ENST00000380871 ETV6P41212 452 aa15.46■□□□□ 0.06
NKX3-1-201ENST00000380871 PCBP3P57721 371 aaKnown RBP15.46■□□□□ 0.06
NKX3-1-201ENST00000380871 LSM11P83369 360 aaKnown RBP eCLIP15.46■□□□□ 0.06
NKX3-1-201ENST00000380871 ZNF234Q14588 700 aa15.46■□□□□ 0.06
NKX3-1-201ENST00000380871 OLIG3Q7RTU3 272 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms