RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 TMBIM6P55061 237 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 CASP9P55211 416 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 SLAMF1Q13291 335 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 MICAQ29983 383 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 LAIR2Q6ISS4 152 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 ZNF793Q6ZN11 406 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 FBXL6Q8N531 539 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 HORMAD2Q8N7B1 307 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 ZNF607Q96SK3 696 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 ROGDIQ9GZN7 287 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 AICDAQ9GZX7 198 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 SPHK1Q9NYA1 384 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 ANKMY1Q9P2S6 941 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 POFUT2Q9Y2G5 429 aa21.91■■□□□ 1.1
VPS16-201ENST00000380443 IL1RL1Q01638 556 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 HSPB3Q12988 150 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 SIM2Q14190 667 aaPredicted RBP21.9■■□□□ 1.1
VPS16-201ENST00000380443 NEDD8Q15843 81 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 TOR1AIP1Q5JTV8 583 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 PAQR7Q86WK9 346 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 ACOT4Q8N9L9 421 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 RPLP0P6Q8NHW5 317 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 SLC38A5Q8WUX1 472 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 HRASLS5Q96KN8 279 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 AMDHD1Q96NU7 426 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 NODALQ96S42 347 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 ABCG4Q9H172 646 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 CCNB1IP1Q9NPC3 277 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 DGKBQ9Y6T7 804 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 B4GAT1O43505 415 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 IFNW1P05000 195 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 ITIH1P19827 911 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 ACSL1P33121 698 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 SPIBQ01892 262 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 GNA13Q14344 377 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 LAPTM4AQ15012 233 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 SLC44A3Q8N4M1 653 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 OR10G2Q8NGC3 310 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 NT5CQ8TCD5 201 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 BBS4Q96RK4 519 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 SRMSQ9H3Y6 488 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 GLIPR2Q9H4G4 154 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 KLHL31Q9H511 634 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 FANCEQ9HB96 536 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 LTB4R2Q9NPC1 389 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 TESMINQ9Y4I5 508 aa21.9■■□□□ 1.1
VPS16-201ENST00000380443 ATG2BQ96BY7 2078 aa21.89■■□□□ 1.1
VPS16-201ENST00000380443 TRIM64BA6NI03 449 aa21.89■■□□□ 1.09
VPS16-201ENST00000380443 C10orf142B7Z368 130 aa21.89■■□□□ 1.09
VPS16-201ENST00000380443 F3P13726 295 aa21.89■■□□□ 1.09
VPS16-201ENST00000380443 SRP54P61011 504 aaKnown RBP21.89■■□□□ 1.09
VPS16-201ENST00000380443 RGS1Q08116 209 aa21.89■■□□□ 1.09
VPS16-201ENST00000380443 XAF1Q6GPH4 301 aa21.89■■□□□ 1.09
VPS16-201ENST00000380443 TMEM92Q6UXU6 159 aa21.89■■□□□ 1.09
VPS16-201ENST00000380443 ZNF605Q86T29 641 aa21.89■■□□□ 1.09
VPS16-201ENST00000380443 OR4E2Q8NGC2 313 aa21.89■■□□□ 1.09
VPS16-201ENST00000380443 C12orf43Q96C57 262 aaKnown RBP21.89■■□□□ 1.09
VPS16-201ENST00000380443 THAP11Q96EK4 314 aa21.89■■□□□ 1.09
VPS16-201ENST00000380443 GIMAP4Q9NUV9 329 aa21.89■■□□□ 1.09
VPS16-201ENST00000380443 ZNF624Q9P2J8 865 aaPredicted RBP21.89■■□□□ 1.09
VPS16-201ENST00000380443 P2RX2Q9UBL9 471 aa21.89■■□□□ 1.09
VPS16-201ENST00000380443 C5orf42Q9H799 3197 aa21.89■■□□□ 1.09
VPS16-201ENST00000380443 MYO10Q9HD67 2058 aa21.88■■□□□ 1.09
VPS16-201ENST00000380443 A6NCN8 305 aa21.88■■□□□ 1.09
VPS16-201ENST00000380443 SERPINB7O75635 380 aa21.88■■□□□ 1.09
VPS16-201ENST00000380443 GPC1P35052 558 aa21.88■■□□□ 1.09
VPS16-201ENST00000380443 ACTR1BP42025 376 aa21.88■■□□□ 1.09
VPS16-201ENST00000380443 ACTR1AP61163 376 aa21.88■■□□□ 1.09
VPS16-201ENST00000380443 RPP38P78345 283 aaKnown RBP21.88■■□□□ 1.09
VPS16-201ENST00000380443 TEKQ02763 1124 aa21.88■■□□□ 1.09
VPS16-201ENST00000380443 PROX2Q3B8N5 592 aa21.88■■□□□ 1.09
VPS16-201ENST00000380443 AMER3Q8N944 861 aa21.88■■□□□ 1.09
VPS16-201ENST00000380443 IPCEF1Q8WWN9 437 aaPredicted RBP21.88■■□□□ 1.09
VPS16-201ENST00000380443 GAL3ST3Q96A11 431 aa21.88■■□□□ 1.09
VPS16-201ENST00000380443 TMEM19Q96HH6 336 aa21.88■■□□□ 1.09
VPS16-201ENST00000380443 SLC35G5Q96KT7 338 aa21.88■■□□□ 1.09
VPS16-201ENST00000380443 DUSP21Q9H596 190 aa21.88■■□□□ 1.09
VPS16-201ENST00000380443 ENTPD4Q9Y227 616 aa21.88■■□□□ 1.09
VPS16-201ENST00000380443 PRAMEF33A0A0G2JMD5 474 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 TCRBV21S2A2A0A5A6 115 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 HMGN4O00479 90 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 ZW10O43264 779 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 TNFSF14O43557 240 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 PRAMEF10O60809 474 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 MFN2O95140 757 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 AGXTP21549 392 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 PCSK6P29122 969 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 PPP2R1BP30154 601 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 RABIFP47224 123 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 LIMS1P48059 325 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 KHKP50053 298 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 RELAQ04206 551 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 MAD2L1BPQ15013 274 aaPredicted RBP21.87■■□□□ 1.09
VPS16-201ENST00000380443 TNFAIP8L2Q6P589 184 aaPredicted RBP21.87■■□□□ 1.09
VPS16-201ENST00000380443 BPIFB6Q8NFQ5 453 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 PROX1Q92786 737 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 SPATA5L1Q9BVQ7 753 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 TMEM121BQ9BXQ6 578 aaPredicted RBP21.87■■□□□ 1.09
VPS16-201ENST00000380443 ZNF556Q9HAH1 456 aa21.87■■□□□ 1.09
VPS16-201ENST00000380443 PRDM9Q9NQV7 894 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms