RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 CENPSQ8N2Z9 138 aa7.35□□□□□ -1.23
CDKL5-202ENST00000379996 OR4C15Q8NGM1 316 aa7.35□□□□□ -1.23
CDKL5-202ENST00000379996 ITFG2Q969R8 447 aa7.35□□□□□ -1.23
CDKL5-202ENST00000379996 ALPK1Q96QP1 1244 aa7.35□□□□□ -1.23
CDKL5-202ENST00000379996 DPH2Q9BQC3 489 aaPredicted RBP7.35□□□□□ -1.23
CDKL5-202ENST00000379996 PSD2Q9BQI7 771 aa7.35□□□□□ -1.23
CDKL5-202ENST00000379996 AASDHPPTQ9NRN7 309 aa7.35□□□□□ -1.23
CDKL5-202ENST00000379996 GPATCH2Q9NW75 528 aa7.35□□□□□ -1.23
CDKL5-202ENST00000379996 A0A1B0GTQ1 180 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 PRAMEF25A6NGN4 478 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 LMO7DNF2Z398 122 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 GIPC1O14908 333 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 ST8SIA5O15466 376 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 SERPINB7O75635 380 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 CATP04040 527 aaKnown RBP7.34□□□□□ -1.23
CDKL5-202ENST00000379996 PNLIPP16233 465 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 EPHA2P29317 976 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 FASLGP48023 281 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 LIMS1P48059 325 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 EEF1A2Q05639 463 aaKnown RBP7.34□□□□□ -1.23
CDKL5-202ENST00000379996 ILF3Q12906 894 aaKnown RBP eCLIP7.34□□□□□ -1.23
CDKL5-202ENST00000379996 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.34□□□□□ -1.23
CDKL5-202ENST00000379996 CACHD1Q5VU97 1274 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 DOK6Q6PKX4 331 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 CRTC3Q6UUV7 619 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 BPIFB6Q8NFQ5 453 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 OR56A3Q8NH54 315 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 CLHC1Q8NHS4 586 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 WDR34Q96EX3 536 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 ITCHQ96J02 903 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 COX4I2Q96KJ9 171 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 MROQ9BYG7 248 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 ENAMQ9NRM1 1142 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 INIPQ9NRY2 104 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 CUEDC1Q9NWM3 386 aaPredicted RBP7.34□□□□□ -1.23
CDKL5-202ENST00000379996 WWOXQ9NZC7 414 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 BTBD3Q9Y2F9 522 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 TDRKHQ9Y2W6 561 aaKnown RBP7.34□□□□□ -1.23
CDKL5-202ENST00000379996 TSC22D4Q9Y3Q8 395 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 AP1M2Q9Y6Q5 423 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 ARHGEF33A8MVX0 844 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 PCDHGA12O60330 932 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 CBFA2T3O75081 653 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 PIAS2O75928 621 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 ZBTB11O95625 1053 aaPredicted RBP7.34□□□□□ -1.23
CDKL5-202ENST00000379996 S100BP04271 92 aaPredicted RBP7.34□□□□□ -1.23
CDKL5-202ENST00000379996 SLC35G4P0C7Q5 338 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 JUPP14923 745 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 PDHA2P29803 388 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 NBL1P41271 181 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 TRPC1P48995 793 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 HSPA14Q0VDF9 509 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 CSTF3Q12996 717 aaKnown RBP7.34□□□□□ -1.23
CDKL5-202ENST00000379996 FADDQ13158 208 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 RPE65Q16518 533 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 RFX4Q33E94 735 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 UBE2UQ5VVX9 321 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 UBE2R2Q712K3 238 aaPredicted RBP7.34□□□□□ -1.23
CDKL5-202ENST00000379996 RNF175Q8N4F7 328 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 FAM181AQ8N9Y4 354 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 GOT1L1Q8NHS2 421 aaPredicted RBP7.34□□□□□ -1.23
CDKL5-202ENST00000379996 MCOLN3Q8TDD5 553 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 OR4K3Q96R72 315 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 ZNF347Q96SE7 839 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 SGPP1Q9BX95 441 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 SLIRPQ9GZT3 109 aaKnown RBP7.34□□□□□ -1.23
CDKL5-202ENST00000379996 NXF2Q9GZY0 626 aaKnown RBP7.34□□□□□ -1.23
CDKL5-202ENST00000379996 TM7SF3Q9NS93 570 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 APOBEC3BQ9UH17 382 aaKnown RBP7.34□□□□□ -1.23
CDKL5-202ENST00000379996 OSGIN1Q9UJX0 560 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 SLC6A14Q9UN76 642 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 COLEC10Q9Y6Z7 277 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 OR2A25A4D2G3 310 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 BCKDKO14874 412 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 ETHE1O95571 254 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 ANXA5P08758 320 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 ACP5P13686 325 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 PORP16435 677 aaPredicted RBP7.34□□□□□ -1.23
CDKL5-202ENST00000379996 TGM1P22735 817 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 DOC2BQ14184 412 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 NUMA1Q14980 2115 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 MAD2L1BPQ15013 274 aaPredicted RBP7.34□□□□□ -1.23
CDKL5-202ENST00000379996 CLPPQ16740 277 aaPredicted RBP7.34□□□□□ -1.23
CDKL5-202ENST00000379996 IMPG1Q17R60 797 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 NOXRED1Q6NXP6 359 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 SPESP1Q6UW49 350 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 CLEC4FQ8N1N0 589 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 ARL10Q8N8L6 244 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 OR9A1PQ8NGU1 263 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 GIPC3Q8TF64 312 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 SETD7Q8WTS6 366 aaKnown RBP7.34□□□□□ -1.23
CDKL5-202ENST00000379996 RAD51AP1Q96B01 352 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 METTL2AQ96IZ6 378 aaKnown RBP7.34□□□□□ -1.23
CDKL5-202ENST00000379996 ELF4Q99607 663 aaPredicted RBP7.34□□□□□ -1.23
CDKL5-202ENST00000379996 SPATA9Q9BWV2 254 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 RAB33BQ9H082 229 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 TMEM168Q9H0V1 697 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 NECTIN3Q9NQS3 549 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 TMEM74BQ9NUR3 256 aa7.34□□□□□ -1.23
CDKL5-202ENST00000379996 TMEM184CQ9NVA4 438 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms