RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 SELPLGQ14242 412 aa23.16■■□□□ 1.3
ECHDC3-201ENST00000379215 FXNQ16595 210 aa23.16■■□□□ 1.3
ECHDC3-201ENST00000379215 OR2T12Q8NG77 320 aa23.16■■□□□ 1.3
ECHDC3-201ENST00000379215 FAM120BQ96EK7 910 aaKnown RBP23.16■■□□□ 1.3
ECHDC3-201ENST00000379215 AMDHD1Q96NU7 426 aa23.16■■□□□ 1.3
ECHDC3-201ENST00000379215 DPH2Q9BQC3 489 aaPredicted RBP23.16■■□□□ 1.3
ECHDC3-201ENST00000379215 SLC35A5Q9BS91 424 aa23.16■■□□□ 1.3
ECHDC3-201ENST00000379215 PCDHB3Q9Y5E6 796 aa23.16■■□□□ 1.3
ECHDC3-201ENST00000379215 FAM220BPB1ANY3 271 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 CYR61O00622 381 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 ACOT8O14734 319 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 CHST10O43529 356 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 GMNNO75496 209 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 PRKRAO75569 313 aaKnown RBP23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 GPX2P18283 190 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 VAC14Q08AM6 782 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 GAB1Q13480 694 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 PHF19Q5T6S3 580 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 DHFR2Q86XF0 187 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 FAM156AQ8NDB6 213 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 OR5T3Q8NGG3 340 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 MMABQ96EY8 250 aaPredicted RBP23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 AURKBQ96GD4 344 aaPredicted RBP23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 CSF3RQ99062 836 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 TRIM8Q9BZR9 551 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 GLIPR2Q9H4G4 154 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 SLAMF7Q9NQ25 335 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 MAGEL2Q9UJ55 1249 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 HCN4Q9Y3Q4 1203 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 SNX13Q9Y5W8 968 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 RP1P56715 2156 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 ENTPD5O75356 428 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 GPC1P35052 558 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 SOAT1P35610 550 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 CHI3L1P36222 383 aaPredicted RBP23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 NBL1P41271 181 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 GCGRP47871 477 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 FADDQ13158 208 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 BHLHB9Q6PI77 547 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 TMEM64Q6YI46 380 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 IFNEQ86WN2 208 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 PROSER1Q86XN7 944 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 LRRC25Q8N386 305 aaPredicted RBP23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 OR10A6Q8NH74 314 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 MOAP1Q96BY2 351 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 CNRIP1Q96F85 164 aaPredicted RBP23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 REXO5Q96IC2 774 aaKnown RBP23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 LRGUKQ96M69 825 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 IKZF5Q9H5V7 419 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 ACTR3BQ9P1U1 418 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 RARRES3Q9UL19 164 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 ERVK-11Q9UQG0 969 aa23.15■■□□□ 1.3
ECHDC3-201ENST00000379215 DSCR3O14972 297 aa23.14■■□□□ 1.29
ECHDC3-201ENST00000379215 CASC3O15234 703 aaKnown RBP23.14■■□□□ 1.29
ECHDC3-201ENST00000379215 FKBP6O75344 327 aa23.14■■□□□ 1.29
ECHDC3-201ENST00000379215 CSTF2P33240 577 aaKnown RBP eCLIP23.14■■□□□ 1.29
ECHDC3-201ENST00000379215 HSPB3Q12988 150 aa23.14■■□□□ 1.29
ECHDC3-201ENST00000379215 ERICH5Q6P6B1 374 aa23.14■■□□□ 1.29
ECHDC3-201ENST00000379215 CALHM3Q86XJ0 350 aa23.14■■□□□ 1.29
ECHDC3-201ENST00000379215 ZNF595Q8IYB9 648 aa23.14■■□□□ 1.29
ECHDC3-201ENST00000379215 UCN3Q969E3 161 aa23.14■■□□□ 1.29
ECHDC3-201ENST00000379215 ZNF681Q96N22 645 aa23.14■■□□□ 1.29
ECHDC3-201ENST00000379215 ZNF583Q96ND8 569 aa23.14■■□□□ 1.29
ECHDC3-201ENST00000379215 ASXL3Q9C0F0 2248 aa23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 RNF103-CHMP3A0A140T963 221 aa23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 ZNF749O43361 778 aa23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 SLITRK5O94991 958 aa23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 MED26O95402 600 aa23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 MAGEA8P43361 318 aa23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 SIM1P81133 766 aaPredicted RBP23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 E2F1Q01094 437 aa23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 MS4A2Q01362 244 aa23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 ZFP36L1Q07352 338 aaKnown RBP23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 SPDYE7PQ495Y7 208 aa23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 TTLL10Q6ZVT0 673 aa23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 ZNF551Q7Z340 670 aaPredicted RBP23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 GPR155Q7Z3F1 870 aa23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 RCBTB1Q8NDN9 531 aa23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 C7orf57Q8NEG2 295 aa23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 BHLHE22Q8NFJ8 381 aaPredicted RBP23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 OR52N2Q8NGI0 321 aa23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 SFXN5Q8TD22 340 aa23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 PCDHAC1Q9H158 963 aa23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 CXorf36Q9H7Y0 433 aa23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 SIDT1Q9NXL6 827 aaKnown RBP23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 SNX8Q9Y5X2 465 aa23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 UNC13CQ8NB66 2214 aa23.13■■□□□ 1.29
ECHDC3-201ENST00000379215 CACNA1HO95180 2353 aa23.12■■□□□ 1.29
ECHDC3-201ENST00000379215 A0A1B0GX78 115 aa23.12■■□□□ 1.29
ECHDC3-201ENST00000379215 ELOVL7A1L3X0 281 aa23.12■■□□□ 1.29
ECHDC3-201ENST00000379215 CLDN4O14493 209 aa23.12■■□□□ 1.29
ECHDC3-201ENST00000379215 CBFA2T3O75081 653 aa23.12■■□□□ 1.29
ECHDC3-201ENST00000379215 IL10P22301 178 aa23.12■■□□□ 1.29
ECHDC3-201ENST00000379215 MSX2P35548 267 aaPredicted RBP23.12■■□□□ 1.29
ECHDC3-201ENST00000379215 XKP51811 444 aa23.12■■□□□ 1.29
ECHDC3-201ENST00000379215 CYP51A1Q16850 503 aa23.12■■□□□ 1.29
ECHDC3-201ENST00000379215 LCN8Q6JVE9 175 aa23.12■■□□□ 1.29
ECHDC3-201ENST00000379215 AAGABQ6PD74 315 aa23.12■■□□□ 1.29
ECHDC3-201ENST00000379215 AGBL5Q8NDL9 886 aa23.12■■□□□ 1.29
ECHDC3-201ENST00000379215 POP5Q969H6 163 aaKnown RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms