RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 C8orf44Q96CB5 159 aa11.18□□□□□ -0.62
PCNA-201ENST00000379143 TM4SF18Q96CE8 201 aa11.18□□□□□ -0.62
PCNA-201ENST00000379143 FCRL1Q96LA6 429 aa11.18□□□□□ -0.62
PCNA-201ENST00000379143 PELOQ9BRX2 385 aaKnown RBP11.18□□□□□ -0.62
PCNA-201ENST00000379143 ING2Q9H160 280 aa11.18□□□□□ -0.62
PCNA-201ENST00000379143 MEAF6Q9HAF1 191 aa11.18□□□□□ -0.62
PCNA-201ENST00000379143 ATP13A2Q9NQ11 1180 aa11.18□□□□□ -0.62
PCNA-201ENST00000379143 NECTIN3Q9NQS3 549 aa11.18□□□□□ -0.62
PCNA-201ENST00000379143 PNPOQ9NVS9 261 aa11.18□□□□□ -0.62
PCNA-201ENST00000379143 TEX10Q9NXF1 929 aaPredicted RBP11.18□□□□□ -0.62
PCNA-201ENST00000379143 G3BP2Q9UN86 482 aaKnown RBP11.18□□□□□ -0.62
PCNA-201ENST00000379143 POLR3HQ9Y535 204 aaPredicted RBP11.18□□□□□ -0.62
PCNA-201ENST00000379143 PCDHA9Q9Y5H5 950 aa11.18□□□□□ -0.62
PCNA-201ENST00000379143 ARGFXA6NJG6 315 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 LDB3O75112 727 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 PEX11AO75192 247 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 GPR75O95800 540 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 PRB1P04280 392 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 KITP10721 976 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 COX7A2P14406 83 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 PCSK2P16519 638 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 PIK3R1P27986 724 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 ASMTP46597 345 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 RPL38P63173 70 aaKnown RBP11.17□□□□□ -0.62
PCNA-201ENST00000379143 IGLV3-21P80748 117 aaPredicted RBP11.17□□□□□ -0.62
PCNA-201ENST00000379143 FOLH1Q04609 750 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 EEF1A2Q05639 463 aaKnown RBP11.17□□□□□ -0.62
PCNA-201ENST00000379143 PCOLCEQ15113 449 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 ELAVL1Q15717 326 aaKnown RBP11.17□□□□□ -0.62
PCNA-201ENST00000379143 EXT1Q16394 746 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 TBR1Q16650 682 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 SFT2D3Q587I9 215 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 C6orf136Q5SQH8 315 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 SLC48A1Q6P1K1 146 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 RIPOR1Q6ZS17 1223 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 SAMD14Q8IZD0 417 aaPredicted RBP11.17□□□□□ -0.62
PCNA-201ENST00000379143 FNDC5Q8NAU1 212 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 OR4K14Q8NGD5 310 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 DNAJB14Q8TBM8 379 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 C16orf78Q8WTQ4 265 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 TSLPQ969D9 159 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 C3orf30Q96M34 536 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 ARHGAP9Q9BRR9 750 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 EBPLQ9BY08 206 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 ALOXE3Q9BYJ1 711 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 NUF2Q9BZD4 464 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 MYNNQ9NPC7 610 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 ADAP2Q9NPF8 381 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 RYDENQ9NUL5 291 aaKnown RBP11.17□□□□□ -0.62
PCNA-201ENST00000379143 EHD3Q9NZN3 535 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 DLGAP4Q9Y2H0 992 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 ATMQ13315 3056 aa11.17□□□□□ -0.62
PCNA-201ENST00000379143 GLOD5A6NK44 160 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 ERVH48-1M5A8F1 160 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 PGRMC2O15173 223 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 DYRK3O43781 588 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 FGF17O60258 216 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 TGDSO95455 350 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 IFNA16P05015 189 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 JUNP05412 331 aaKnown RBP11.16□□□□□ -0.62
PCNA-201ENST00000379143 IL3P08700 152 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 PRPS2P11908 318 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 DDX5P17844 614 aaKnown RBP11.16□□□□□ -0.62
PCNA-201ENST00000379143 ALDH9A1P49189 494 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 SOX8P57073 446 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 PLIN5Q00G26 463 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 EMX2Q04743 252 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 IRAK1BP1Q5VVH5 260 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 PLAG1Q6DJT9 500 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 PAPD4Q6PIY7 484 aaKnown RBP11.16□□□□□ -0.62
PCNA-201ENST00000379143 CLNKQ7Z7G1 428 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 KBTBD2Q8IY47 623 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 ST13P4Q8IZP2 240 aaPredicted RBP11.16□□□□□ -0.62
PCNA-201ENST00000379143 FAM9CQ8IZT9 166 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.16□□□□□ -0.622e-7■■■□□ 18.3
PCNA-201ENST00000379143 M1APQ8TC57 530 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 DAZLQ92904 295 aaKnown RBP11.16□□□□□ -0.62
PCNA-201ENST00000379143 ANKRD9Q96BM1 317 aaPredicted RBP11.16□□□□□ -0.62
PCNA-201ENST00000379143 RBM18Q96H35 190 aaKnown RBP11.16□□□□□ -0.62
PCNA-201ENST00000379143 IMMP1LQ96LU5 166 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 DGAT2Q96PD7 388 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 ZNF160Q9HCG1 818 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 SLCO1B3Q9NPD5 702 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 MIEF1Q9NQG6 463 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 NOP53Q9NZM5 478 aaKnown RBP11.16□□□□□ -0.62
PCNA-201ENST00000379143 MARCOQ9UEW3 520 aaPredicted RBP11.16□□□□□ -0.62
PCNA-201ENST00000379143 EIF3LQ9Y262 564 aaKnown RBP11.16□□□□□ -0.62
PCNA-201ENST00000379143 CLDN16Q9Y5I7 305 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 ZNF780BQ9Y6R6 833 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 ZNF462Q96JM2 2506 aa11.16□□□□□ -0.62
PCNA-201ENST00000379143 SAGE2PA6NJ88 616 aa11.15□□□□□ -0.62
PCNA-201ENST00000379143 MKRN2OSH3BPM6 223 aa11.15□□□□□ -0.62
PCNA-201ENST00000379143 TGFBR3LH3BV60 316 aa11.15□□□□□ -0.62
PCNA-201ENST00000379143 PRKRAO75569 313 aaKnown RBP11.15□□□□□ -0.62
PCNA-201ENST00000379143 C1QL1O75973 258 aa11.15□□□□□ -0.62
PCNA-201ENST00000379143 SEC24DO94855 1032 aaPredicted RBP11.15□□□□□ -0.62
PCNA-201ENST00000379143 SERPINA7P05543 415 aa11.15□□□□□ -0.62
PCNA-201ENST00000379143 PRR35P0CG20 571 aa11.15□□□□□ -0.62
PCNA-201ENST00000379143 SLC35E2P0CK97 266 aa11.15□□□□□ -0.62
PCNA-201ENST00000379143 SFTPCP11686 197 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms