RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 NFKBIDQ8NI38 313 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 GATA6Q92908 595 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 TMBIM1Q969X1 311 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 C10orf90Q96M02 699 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 ZNF681Q96N22 645 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 MAP3K3Q99759 626 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 DNAJB9Q9UBS3 223 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 PADI4Q9UM07 663 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 B3GALT2O43825 422 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 KIF1CO43896 1103 aaKnown RBP16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 CST1P01037 141 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 ARAFP10398 606 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 ALPPL2P10696 532 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 FEN1P39748 380 aaKnown RBP16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 CTSKP43235 329 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 OLR1P78380 273 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 TNFRSF17Q02223 184 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 BIRC2Q13490 618 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 CEBPEQ15744 281 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 SPDYE7PQ495Y7 208 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 MANEAQ5SRI9 462 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 TBPL2Q6SJ96 375 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 WDR5BQ86VZ2 330 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 CCDC116Q8IYX3 515 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 HSH2DQ96JZ2 352 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 NECAB3Q96P71 396 aaPredicted RBP16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 NR1H4Q96RI1 486 aaPredicted RBP16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 CSF3RQ99062 836 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 SERHL2Q9H4I8 314 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 ERVMER34-1Q9H9K5 563 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 DAPP1Q9UN19 280 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 TECTAO75443 2155 aa16.39■□□□□ 0.21
THUMPD2-201ENST00000378727 ZNF860A6NHJ4 632 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 EI24O14681 340 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 ZNF23P17027 643 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 DHPSP49366 369 aaPredicted RBP16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 IST1P53990 364 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 DSTNP60981 165 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 CDK6Q00534 326 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 ZNF630Q2M218 657 aaPredicted RBP16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 LYSMD4Q5XG99 296 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 TNFAIP8L2Q6P589 184 aaPredicted RBP16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 CEACAM20Q6UY09 585 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 FAM92BQ6ZTR7 304 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 ARHGEF39Q8N4T4 335 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 ZNF655Q8N720 491 aaPredicted RBP16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 ZFP28Q8NHY6 868 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 PHF11Q9UIL8 331 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 RNF215Q9Y6U7 377 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 CACNA1EQ15878 2313 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 GIMD1P0DJR0 217 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 HOXB6P17509 224 aaKnown RBP16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 CPN2P22792 545 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 GPC1P35052 558 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 GFERP55789 205 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 TP53BP2Q13625 1128 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 SPIDRQ14159 915 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 SHBQ15464 509 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 CYBRD1Q53TN4 286 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 NHSL2Q5HYW2 709 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 PMS2CLQ68D20 193 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 ZDHHC21Q8IVQ6 265 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 ZC3H7AQ8IWR0 971 aaKnown RBP16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 MAML2Q8IZL2 1156 aaPredicted RBP16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 MARVELD2Q8N4S9 558 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 DNAJC22Q8N4W6 341 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 CCDC3Q9BQI4 270 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 IL1RAPQ9NPH3 570 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 ENTPD4Q9Y227 616 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 MAGED1Q9Y5V3 778 aaPredicted RBP16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 SLC22A7Q9Y694 548 aa16.38■□□□□ 0.21
THUMPD2-201ENST00000378727 SCN2AQ99250 2005 aa16.37■□□□□ 0.21
THUMPD2-201ENST00000378727 MUC3AQ02505 3323 aa16.37■□□□□ 0.21
THUMPD2-201ENST00000378727 CABIN1Q9Y6J0 2220 aa16.37■□□□□ 0.21
THUMPD2-201ENST00000378727 GALR3O60755 368 aaPredicted RBP16.37■□□□□ 0.21
THUMPD2-201ENST00000378727 UBTFL6P0CB48 400 aaPredicted RBP16.37■□□□□ 0.21
THUMPD2-201ENST00000378727 CSNK2A2P19784 350 aaPredicted RBP16.37■□□□□ 0.21
THUMPD2-201ENST00000378727 BUD31P41223 144 aaPredicted RBP16.37■□□□□ 0.21
THUMPD2-201ENST00000378727 PDK3Q15120 406 aa16.37■□□□□ 0.21
THUMPD2-201ENST00000378727 C6orf132Q5T0Z8 1188 aa16.37■□□□□ 0.21
THUMPD2-201ENST00000378727 CCDC80Q76M96 950 aa16.37■□□□□ 0.21
THUMPD2-201ENST00000378727 MCATQ8IVS2 390 aaKnown RBP16.37■□□□□ 0.21
THUMPD2-201ENST00000378727 TAMM41Q96BW9 452 aa16.37■□□□□ 0.21
THUMPD2-201ENST00000378727 UBAP1Q9NZ09 502 aa16.37■□□□□ 0.21
THUMPD2-201ENST00000378727 ABCG2Q9UNQ0 655 aa16.37■□□□□ 0.21
THUMPD2-201ENST00000378727 NAALAD2Q9Y3Q0 740 aa16.37■□□□□ 0.21
THUMPD2-201ENST00000378727 PCDHGB5Q9Y5G0 923 aa16.37■□□□□ 0.21
THUMPD2-201ENST00000378727 A0A1B0GTW7 788 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 OPN1SWP03999 348 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 ZNF10P21506 573 aaPredicted RBP16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 PCBP3P57721 371 aaKnown RBP16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 KCNJ10P78508 379 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 VLDLRP98155 873 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 GK3PQ14409 553 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 GPR19Q15760 415 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 NKAIN2Q5VXU1 208 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 TMEM64Q6YI46 380 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 OR5T3Q8NGG3 340 aa16.36■□□□□ 0.21
THUMPD2-201ENST00000378727 RAB8BQ92930 207 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms