RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 TRIB2Q92519 343 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 KCNK12Q9HB15 430 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 DYNLRB1Q9NP97 96 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 ZNF355PQ9NSJ1 428 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 KCNIP1Q9NZI2 227 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 DNAJB11Q9UBS4 358 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 KCNIP3Q9Y2W7 256 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 SRPRAP08240 638 aaKnown RBP13.54□□□□□ -0.24
TRIM13-202ENST00000378182 SLC2A5P22732 501 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 IL1R2P27930 398 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 GRIA2P42262 883 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 JAM2P57087 298 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 CREB3L4Q8TEY5 395 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 FBXL8Q96CD0 374 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 FZD8Q9H461 694 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 GJD2Q9UKL4 321 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 HSD11B2P80365 405 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 MFSD13AQ14CX5 517 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 HERC3Q15034 1050 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 LOC100130705A0A1B0GUX0 176 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 MAS1P04201 325 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 BCL2L15Q5TBC7 163 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 UBE2Q1Q7Z7E8 422 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 EID2Q8N6I1 236 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 ZNF180Q9UJW8 692 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 PEX16Q9Y5Y5 336 aa13.54□□□□□ -0.24
TRIM13-202ENST00000378182 SAGE2PA6NJ88 616 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 CXorf49A8MYA2 514 aaPredicted RBP13.53□□□□□ -0.24
TRIM13-202ENST00000378182 H0YJX3 145 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 TGM5O43548 720 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 ANXA3P12429 323 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 PRKACGP22612 351 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 THBS2P35442 1172 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 RABIFP47224 123 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 POLR2HP52434 150 aaKnown RBP13.53□□□□□ -0.24
TRIM13-202ENST00000378182 CLDN2P57739 230 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 RBPJQ06330 500 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 HOXB13Q92826 284 aaPredicted RBP13.53□□□□□ -0.24
TRIM13-202ENST00000378182 ZC3HAV1LQ96H79 300 aaKnown RBP13.53□□□□□ -0.24
TRIM13-202ENST00000378182 PISDQ9UG56 409 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 PNMTP11086 282 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 GSTM3P21266 225 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 DPP6P42658 865 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 NANOS1Q8WY41 292 aaKnown RBP13.53□□□□□ -0.24
TRIM13-202ENST00000378182 HSH2DQ96JZ2 352 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 FUZQ9BT04 418 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 C2orf42Q9NWW7 574 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 CLEC4EQ9ULY5 219 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 ZNF217O75362 1048 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 TNFSF4P23510 183 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 PSMA6P60900 246 aaKnown RBP13.53□□□□□ -0.24
TRIM13-202ENST00000378182 RAB4BP61018 213 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 RPS26P62854 115 aaKnown RBP13.53□□□□□ -0.24
TRIM13-202ENST00000378182 DHCR24Q15392 516 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 SWT1Q5T5J6 900 aaKnown RBP13.53□□□□□ -0.24
TRIM13-202ENST00000378182 NPAS3Q8IXF0 933 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 A0A0U1RQK1 487 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 ARGFXA6NJG6 315 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 B8ZZF3 427 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 GLDCP23378 1020 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 LSSP48449 732 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 CRYZQ08257 329 aaKnown RBP13.53□□□□□ -0.24
TRIM13-202ENST00000378182 RUNX2Q13950 521 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 PPA1Q15181 289 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 BBS10Q8TAM1 723 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 FCAMRQ8WWV6 532 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 NFKBIEO00221 500 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 ENSAO43768 121 aaKnown RBP13.53□□□□□ -0.24
TRIM13-202ENST00000378182 DPY19L1Q2PZI1 675 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 GRHL2Q6ISB3 625 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 OR5L2Q8NGL0 311 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 MFSD8Q8NHS3 518 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 STON2Q8WXE9 905 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 TM9SF4Q92544 642 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 UBXN10Q96LJ8 280 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 DPH7Q9BTV6 452 aa13.53□□□□□ -0.24
TRIM13-202ENST00000378182 ARSAP15289 507 aa13.52□□□□□ -0.24
TRIM13-202ENST00000378182 GDF1P27539 372 aa13.52□□□□□ -0.24
TRIM13-202ENST00000378182 RNF220Q5VTB9 566 aa13.52□□□□□ -0.24
TRIM13-202ENST00000378182 FAM205BPQ63HN1 556 aa13.52□□□□□ -0.24
TRIM13-202ENST00000378182 MTMR14Q8NCE2 650 aa13.52□□□□□ -0.24
TRIM13-202ENST00000378182 DGCR14Q96DF8 476 aaKnown RBP13.52□□□□□ -0.24
TRIM13-202ENST00000378182 MS4A12Q9NXJ0 267 aa13.52□□□□□ -0.24
TRIM13-202ENST00000378182 A8MT66 165 aa13.52□□□□□ -0.24
TRIM13-202ENST00000378182 H7C417 338 aa13.52□□□□□ -0.24
TRIM13-202ENST00000378182 AK4P27144 223 aaPredicted RBP13.52□□□□□ -0.24
TRIM13-202ENST00000378182 GPR4P46093 362 aa13.52□□□□□ -0.24
TRIM13-202ENST00000378182 DSC1Q08554 894 aa13.52□□□□□ -0.24
TRIM13-202ENST00000378182 SMAD2Q15796 467 aaKnown RBP13.52□□□□□ -0.24
TRIM13-202ENST00000378182 RDH12Q96NR8 316 aa13.52□□□□□ -0.24
TRIM13-202ENST00000378182 PIP5K1AQ99755 562 aa13.52□□□□□ -0.24
TRIM13-202ENST00000378182 CRB3Q9BUF7 120 aa13.52□□□□□ -0.24
TRIM13-202ENST00000378182 ZBTB26Q9HCK0 441 aa13.52□□□□□ -0.24
TRIM13-202ENST00000378182 B3GNT2Q9NY97 397 aa13.52□□□□□ -0.24
TRIM13-202ENST00000378182 VDAC3Q9Y277 283 aa13.52□□□□□ -0.24
TRIM13-202ENST00000378182 ITGB8P26012 769 aa13.52□□□□□ -0.24
TRIM13-202ENST00000378182 TUBB3Q13509 450 aa13.52□□□□□ -0.24
TRIM13-202ENST00000378182 APCDD1Q8J025 514 aa13.52□□□□□ -0.24
TRIM13-202ENST00000378182 FTMTQ8N4E7 242 aa13.52□□□□□ -0.24
TRIM13-202ENST00000378182 KRTCAP2Q8N6L1 136 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms