RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 INTS9Q9NV88 658 aaKnown RBP12.4□□□□□ -0.42
CKAP2-202ENST00000378034 TEX10Q9NXF1 929 aaPredicted RBP12.4□□□□□ -0.42
CKAP2-202ENST00000378034 PSME2Q9UL46 239 aa12.4□□□□□ -0.42
CKAP2-202ENST00000378034 IGHV3-20A0A0C4DH32 117 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 SAGE2PA6NJ88 616 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 FGF17O60258 216 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 LDB3O75112 727 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 DNAJB5O75953 348 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 PRR35P0CG20 571 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 NR1D1P20393 614 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 GALNSP34059 522 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 TAS2R50P59544 299 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 FOLH1Q04609 750 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 ZNF763Q0D2J5 394 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 Q0VFX4 171 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 HEPACAMQ14CZ8 416 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 TCTN3Q6NUS6 607 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 PARP9Q8IXQ6 854 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 EXD3Q8N9H8 876 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 C16orf78Q8WTQ4 265 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 C19orf60Q96EN9 201 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 ABHD17AQ96GS6 310 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 THOC3Q96J01 351 aaKnown RBP12.39□□□□□ -0.43
CKAP2-202ENST00000378034 MMP25Q9NPA2 562 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 GPR83Q9NYM4 423 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 C5AR2Q9P296 337 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 PPIEQ9UNP9 301 aaKnown RBP12.39□□□□□ -0.43
CKAP2-202ENST00000378034 PTGDR2Q9Y5Y4 395 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 MED13Q9UHV7 2174 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 LOC400499M0QZD8 3231 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 SLCO1B7G3V0H7 640 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 PGRMC2O15173 223 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 IFNA16P05015 189 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 ALPPP05187 535 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 COX7A2P14406 83 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 PIK3R1P27986 724 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 MAPK1P28482 360 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 STT3AP46977 705 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 HK2P52789 917 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 SLC26A5P58743 744 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 PLIN5Q00G26 463 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 OCRLQ01968 901 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 SMU1Q2TAY7 513 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 BTBD16Q32M84 506 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 ATP6AP1LQ52LC2 224 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 VWA5B1Q5TIE3 1220 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 SLC48A1Q6P1K1 146 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 IKBIPQ70UQ0 350 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 LRRC34Q8IZ02 419 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 ST13P4Q8IZP2 240 aaPredicted RBP12.39□□□□□ -0.43
CKAP2-202ENST00000378034 FDCSPQ8NFU4 85 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 OR4K14Q8NGD5 310 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 OR14A16Q8NHC5 309 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 C9orf43Q8TAL5 461 aaPredicted RBP12.39□□□□□ -0.43
CKAP2-202ENST00000378034 LRRC8CQ8TDW0 803 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 DYDC1Q8WWB3 177 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 DAZLQ92904 295 aaKnown RBP12.39□□□□□ -0.43
CKAP2-202ENST00000378034 RBM18Q96H35 190 aaKnown RBP12.39□□□□□ -0.43
CKAP2-202ENST00000378034 SMAD5Q99717 465 aaKnown RBP12.39□□□□□ -0.43
CKAP2-202ENST00000378034 MYNNQ9NPC7 610 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 PNO1Q9NRX1 252 aaKnown RBP12.39□□□□□ -0.43
CKAP2-202ENST00000378034 EHD3Q9NZN3 535 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 CES1P1Q9UKY3 287 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 DLGAP4Q9Y2H0 992 aa12.39□□□□□ -0.43
CKAP2-202ENST00000378034 A6NL46 340 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 SKAP2O75563 359 aaPredicted RBP12.38□□□□□ -0.43
CKAP2-202ENST00000378034 PRKRAO75569 313 aaKnown RBP12.38□□□□□ -0.43
CKAP2-202ENST00000378034 ALOX15P16050 662 aaPredicted RBP12.38□□□□□ -0.43
CKAP2-202ENST00000378034 SAMD14Q8IZD0 417 aaPredicted RBP12.38□□□□□ -0.43
CKAP2-202ENST00000378034 ARFGAP2Q8N6H7 521 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 MORN4Q8NDC4 146 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 NFAM1Q8NET5 270 aaPredicted RBP12.38□□□□□ -0.43
CKAP2-202ENST00000378034 B3GNT7Q8NFL0 401 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.38□□□□□ -0.43
CKAP2-202ENST00000378034 DGAT2Q96PD7 388 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 EBPLQ9BY08 206 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 ZNF451Q9Y4E5 1061 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 POLR3HQ9Y535 204 aaPredicted RBP12.38□□□□□ -0.43
CKAP2-202ENST00000378034 CLCA3PQ9Y6N3 262 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 NBEAQ8NFP9 2946 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 GLOD5A6NK44 160 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 MASP2O00187 686 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 DYRK3O43781 588 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 VPS4BO75351 444 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 IL3P08700 152 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 SLC35E2P0CK97 266 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 TNNI3P19429 210 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 PGDP52209 483 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 RPL38P63173 70 aaKnown RBP12.38□□□□□ -0.43
CKAP2-202ENST00000378034 MAD2L1Q13257 205 aaPredicted RBP12.38□□□□□ -0.43
CKAP2-202ENST00000378034 GALNTL6Q49A17 601 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 RFTN2Q52LD8 501 aaPredicted RBP12.38□□□□□ -0.43
CKAP2-202ENST00000378034 CRB2Q5IJ48 1285 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 AGAP7PQ5VUJ5 663 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 OR4N5Q8IXE1 308 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 C3orf30Q96M34 536 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 AGAP4Q96P64 663 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 NUDT9Q9BW91 350 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 SLC25A18Q9H1K4 315 aa12.38□□□□□ -0.43
CKAP2-202ENST00000378034 ZNF552Q9H707 407 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms