RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 TBCCQ15814 346 aa17.77■□□□□ 0.44
CBWD3-204ENST00000377349 ARHGAP11AQ6P4F7 1023 aa17.77■□□□□ 0.44
CBWD3-204ENST00000377349 ZNF793Q6ZN11 406 aa17.77■□□□□ 0.44
CBWD3-204ENST00000377349 CHSY3Q70JA7 882 aa17.77■□□□□ 0.44
CBWD3-204ENST00000377349 SRFBP1Q8NEF9 429 aaKnown RBP17.77■□□□□ 0.44
CBWD3-204ENST00000377349 MNS1Q8NEH6 495 aa17.77■□□□□ 0.44
CBWD3-204ENST00000377349 OR7G3Q8NG95 312 aa17.77■□□□□ 0.44
CBWD3-204ENST00000377349 LILRB4Q8NHJ6 448 aa17.77■□□□□ 0.44
CBWD3-204ENST00000377349 ZNF473Q8WTR7 871 aaKnown RBP17.77■□□□□ 0.44
CBWD3-204ENST00000377349 MTERF1Q99551 399 aaKnown RBP17.77■□□□□ 0.44
CBWD3-204ENST00000377349 ALOXE3Q9BYJ1 711 aa17.77■□□□□ 0.44
CBWD3-204ENST00000377349 UCK2Q9BZX2 261 aa17.77■□□□□ 0.44
CBWD3-204ENST00000377349 OR8D2Q9GZM6 311 aa17.77■□□□□ 0.44
CBWD3-204ENST00000377349 ROGDIQ9GZN7 287 aa17.77■□□□□ 0.44
CBWD3-204ENST00000377349 CDC42EP4Q9H3Q1 356 aaKnown RBP17.77■□□□□ 0.44
CBWD3-204ENST00000377349 ZDHHC11Q9H8X9 412 aa17.77■□□□□ 0.44
CBWD3-204ENST00000377349 ADAP2Q9NPF8 381 aa17.77■□□□□ 0.44
CBWD3-204ENST00000377349 PRDM7Q9NQW5 492 aa17.77■□□□□ 0.44
CBWD3-204ENST00000377349 ERVK-11Q9UQG0 969 aa17.77■□□□□ 0.44
CBWD3-204ENST00000377349 POC1B-GALNT4F8VUJ3 575 aa17.76■□□□□ 0.43
CBWD3-204ENST00000377349 OR2J2O76002 312 aa17.76■□□□□ 0.43
CBWD3-204ENST00000377349 PDE9AO76083 593 aa17.76■□□□□ 0.43
CBWD3-204ENST00000377349 OR6B1O95007 311 aa17.76■□□□□ 0.43
CBWD3-204ENST00000377349 KLHL2O95198 593 aa17.76■□□□□ 0.43
CBWD3-204ENST00000377349 TUBB4AP04350 444 aa17.76■□□□□ 0.43
CBWD3-204ENST00000377349 ATP5A1P25705 553 aaKnown RBP17.76■□□□□ 0.43
CBWD3-204ENST00000377349 GRHL2Q6ISB3 625 aa17.76■□□□□ 0.43
CBWD3-204ENST00000377349 UBE3DQ7Z6J8 389 aa17.76■□□□□ 0.43
CBWD3-204ENST00000377349 ACOT4Q8N9L9 421 aa17.76■□□□□ 0.43
CBWD3-204ENST00000377349 CMTM7Q96FZ5 175 aa17.76■□□□□ 0.43
CBWD3-204ENST00000377349 FMO2Q99518 471 aa17.76■□□□□ 0.43
CBWD3-204ENST00000377349 CENPKQ9BS16 269 aa17.76■□□□□ 0.43
CBWD3-204ENST00000377349 TBCDQ9BTW9 1192 aa17.76■□□□□ 0.43
CBWD3-204ENST00000377349 DEFB127Q9H1M4 99 aa17.76■□□□□ 0.43
CBWD3-204ENST00000377349 TP63Q9H3D4 680 aaPredicted RBP17.76■□□□□ 0.43
CBWD3-204ENST00000377349 ACSS3Q9H6R3 686 aa17.76■□□□□ 0.43
CBWD3-204ENST00000377349 TIMMDC1Q9NPL8 285 aa17.76■□□□□ 0.43
CBWD3-204ENST00000377349 DMGDHQ9UI17 866 aaKnown RBP17.76■□□□□ 0.43
CBWD3-204ENST00000377349 HMX2A2RU54 273 aa17.75■□□□□ 0.43
CBWD3-204ENST00000377349 ZNF354AO60765 605 aaPredicted RBP17.75■□□□□ 0.43
CBWD3-204ENST00000377349 ZFAND5O76080 213 aa17.75■□□□□ 0.43
CBWD3-204ENST00000377349 ALDOAP04075 364 aaKnown RBP17.75■□□□□ 0.43
CBWD3-204ENST00000377349 CTAGE8P0CG41 777 aa17.75■□□□□ 0.43
CBWD3-204ENST00000377349 HIST1H1TP22492 207 aaPredicted RBP17.75■□□□□ 0.43
CBWD3-204ENST00000377349 MSX1P28360 303 aa17.75■□□□□ 0.43
CBWD3-204ENST00000377349 CHRNB4P30926 498 aa17.75■□□□□ 0.43
CBWD3-204ENST00000377349 PHEXP78562 749 aa17.75■□□□□ 0.43
CBWD3-204ENST00000377349 SETDB1Q15047 1291 aa17.75■□□□□ 0.43
CBWD3-204ENST00000377349 ACAP2Q15057 778 aa17.75■□□□□ 0.43
CBWD3-204ENST00000377349 ELAVL1Q15717 326 aaKnown RBP17.75■□□□□ 0.43
CBWD3-204ENST00000377349 TMEM35AQ53FP2 167 aa17.75■□□□□ 0.43
CBWD3-204ENST00000377349 KHDRBS2Q5VWX1 349 aaKnown RBP17.75■□□□□ 0.43
CBWD3-204ENST00000377349 TAOK1Q7L7X3 1001 aa17.75■□□□□ 0.43
CBWD3-204ENST00000377349 CCDC71Q8IV32 467 aaPredicted RBP17.75■□□□□ 0.43
CBWD3-204ENST00000377349 CTAGE4Q8IX94 777 aa17.75■□□□□ 0.43
CBWD3-204ENST00000377349 OR4N5Q8IXE1 308 aa17.75■□□□□ 0.43
CBWD3-204ENST00000377349 TMEM132CQ8N3T6 1108 aa17.75■□□□□ 0.43
CBWD3-204ENST00000377349 OR2M7Q8NG81 312 aa17.75■□□□□ 0.43
CBWD3-204ENST00000377349 HUS1BQ8NHY5 278 aa17.75■□□□□ 0.43
CBWD3-204ENST00000377349 ASB5Q8WWX0 329 aa17.75■□□□□ 0.43
CBWD3-204ENST00000377349 ATP6V1E2Q96A05 226 aa17.75■□□□□ 0.43
CBWD3-204ENST00000377349 RASL10BQ96S79 203 aa17.75■□□□□ 0.43
CBWD3-204ENST00000377349 MYOTQ9UBF9 498 aa17.75■□□□□ 0.43
CBWD3-204ENST00000377349 TNFRSF10DQ9UBN6 386 aa17.75■□□□□ 0.43
CBWD3-204ENST00000377349 EXPH5Q8NEV8 1989 aa17.75■□□□□ 0.43
CBWD3-204ENST00000377349 NIPBLQ6KC79 2804 aaeCLIP17.75■□□□□ 0.43
CBWD3-204ENST00000377349 FAM90A27PA6NNH2 459 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 A8MVJ9 347 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 C17orf105B2RV13 164 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 WWP2O00308 870 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 CTNSO60931 367 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 GLSO94925 669 aaPredicted RBP17.74■□□□□ 0.43
CBWD3-204ENST00000377349 SIX3O95343 332 aaPredicted RBP17.74■□□□□ 0.43
CBWD3-204ENST00000377349 MTHFD2P13995 350 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 SOX3P41225 446 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 CASP2P42575 452 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 PIK3CGP48736 1102 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 ALDH18A1P54886 795 aaKnown RBP17.74■□□□□ 0.43
CBWD3-204ENST00000377349 NUP107P57740 925 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 SLAMF1Q13291 335 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 GTF2H2Q13888 395 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 CPSF6Q16630 551 aaKnown RBP eCLIP17.74■□□□□ 0.43
CBWD3-204ENST00000377349 TMEM211Q6ICI0 200 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 GTF2H2CQ6P1K8 395 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 GOLGA7Q7Z5G4 137 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 CCDC91Q7Z6B0 441 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 GPALPP1Q8IXQ4 340 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 LAS2Q8IYD9 372 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 MMGT1Q8N4V1 131 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 ZNF321PQ8N8H1 164 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 RHEBL1Q8TAI7 183 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 PTPMT1Q8WUK0 201 aaPredicted RBP17.74■□□□□ 0.43
CBWD3-204ENST00000377349 DAZLQ92904 295 aaKnown RBP17.74■□□□□ 0.43
CBWD3-204ENST00000377349 PHF21BQ96EK2 531 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 PAFAH2Q99487 392 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 IPPKQ9H8X2 491 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 LYRM4Q9HD34 91 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 ZNF358Q9NW07 568 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 HPF1Q9NWY4 346 aa17.74■□□□□ 0.43
CBWD3-204ENST00000377349 LIPGQ9Y5X9 500 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms