RNA–Protein interactions for RNA: ENST00000377327.8

CRNKL1-201, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-201ENST00000377327 APIPQ96GX9 242 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 MAP6Q96JE9 813 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 RNF167Q9H6Y7 350 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 TMEM27Q9HBJ8 222 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 KIAA1522Q9P206 1035 aaPredicted RBP8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 NDRG4Q9ULP0 352 aaKnown RBP8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 SCML2Q9UQR0 700 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 DLGAP4Q9Y2H0 992 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 ABHD14A-ACY1A0A1B0GW23 586 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 KRBOX1C9JBD0 128 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 ZNF670-ZNF695F2Z2N8 137 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 PI15O43692 258 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 SCG5P05408 212 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 SDC1P18827 310 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 KELP23276 732 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 POU6F2P78424 691 aaPredicted RBP8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 ASAH1Q13510 395 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 UGT3A2Q3SY77 523 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 RTL4Q6ZR62 310 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 SLC16A12Q6ZSM3 486 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 SYT14Q8NB59 555 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 OR2M2Q96R28 347 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 NEUROD4Q9HD90 331 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 TAS2R16Q9NYV7 291 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 E2F3O00716 465 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 ALPPP05187 535 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 AKR1A1P14550 325 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 EPCAMP16422 314 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 RPS19P39019 145 aaKnown RBP8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 MLLT10P55197 1068 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 DBPQ10586 325 aaPredicted RBP8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 NFATC2Q13469 925 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 RAET1GQ6H3X3 334 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 RGMBQ6NW40 437 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 WASH2PQ6VEQ5 465 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 RANBP3LQ86VV4 465 aaPredicted RBP8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 FCAMRQ8WWV6 532 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 OR51B5Q9H339 312 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 TRPV4Q9HBA0 871 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 ADARB2Q9NS39 739 aaKnown RBP8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 AP1M2Q9Y6Q5 423 aa8.68□□□□□ -1.02
CRNKL1-201ENST00000377327 A0A1B0GUL6 1792 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 SMLR1H3BR10 107 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 GFRA2O00451 464 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 KDELR3O43731 214 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 URODP06132 367 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 JUPP14923 745 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 ARNTP27540 789 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 HTR2AP28223 471 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 PCGF2P35227 344 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 CDKN1CP49918 316 aaPredicted RBP8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 EIF5AP63241 154 aaKnown RBP8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 BIKQ13323 160 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 GRK1Q15835 563 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 POM121L1PQ3SYA9 428 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 PRAMEF17Q5VTA0 474 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 DEFB132Q7Z7B7 95 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 PDZD3Q86UT5 571 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 OR52N2Q8NGI0 321 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 THAP6Q8TBB0 222 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 EXO5Q9H790 373 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 GALNT9Q9HCQ5 603 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 TRPM3Q9HCF6 1732 aaPredicted RBP8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 CITO14578 2027 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 A0A1W2PRQ8 180 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 TPPPO94811 219 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 ALDOBP05062 364 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 HSD3B1P14060 373 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 SMPD1P17405 629 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 HSD3B2P26439 372 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 HK3P52790 923 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 ZXDBP98169 803 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 MLLT1Q03111 559 aaPredicted RBP8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 TRAM1Q15629 374 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 BAIAP2L2Q6UXY1 529 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 CFAP77Q6ZQR2 320 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 STX12Q86Y82 276 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 GPC2Q8N158 579 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 ACBD7Q8N6N7 88 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 IGSF8Q969P0 613 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 KIAA1143Q96AT1 154 aaPredicted RBP8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 MCCC1Q96RQ3 725 aaPredicted RBP8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 OR10A4Q9H209 315 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 PADI3Q9ULW8 664 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 RASGRP1O95267 797 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 ELFN1P0C7U0 828 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 PRKAR2AP13861 404 aaKnown RBP8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 RAB3BP20337 219 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 UQCRC2P22695 453 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 TIA1P31483 386 aaKnown RBP eCLIP8.67□□□□□ -1.022e-9■■■■□ 26.7
CRNKL1-201ENST00000377327 EIF2B5Q13144 721 aaKnown RBP8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 TRAM2Q15035 370 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 FCN2Q15485 313 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 EIF5AL1Q6IS14 154 aaKnown RBP8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 PIANPQ8IYJ0 282 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 IQCF1Q8N6M8 205 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 GNPDA2Q8TDQ7 276 aa8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 TRIM43Q96BQ3 446 aaPredicted RBP8.67□□□□□ -1.02
CRNKL1-201ENST00000377327 CLIP3Q96DZ5 547 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms