RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 PIRTP0C851 137 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 EPHX2P34913 555 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 HMGCLP35914 325 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 PSPHP78330 225 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 TAP2Q03519 686 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 ACTBL2Q562R1 376 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 SYT6Q5T7P8 510 aaPredicted RBP9.78□□□□□ -0.84
PTCH1-204ENST00000375290 OR52N2Q8NGI0 321 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 GAL3ST3Q96A11 431 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 PGLYRP2Q96PD5 576 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 TMEM175Q9BSA9 504 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 DEC1Q9P2X7 70 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 BUD23O43709 281 aaKnown RBP9.78□□□□□ -0.84
PTCH1-204ENST00000375290 SLC43A1O75387 559 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 TFP02787 698 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 TRA2BP62995 288 aaKnown RBP9.78□□□□□ -0.84
PTCH1-204ENST00000375290 DECR1Q16698 335 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 IFNLR1Q8IU57 520 aaPredicted RBP9.78□□□□□ -0.84
PTCH1-204ENST00000375290 ANGPTL6Q8NI99 470 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 ARNTL2Q8WYA1 636 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 TIGARQ9NQ88 270 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 A0A1W2PQ45 241 aaPredicted RBP9.78□□□□□ -0.84
PTCH1-204ENST00000375290 A0A1W2PQY0 241 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 G3V2L1 256 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 PEX10O60683 326 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 SRCP12931 536 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 CD9P21926 228 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 ATXN1P54253 815 aaKnown RBP9.78□□□□□ -0.84
PTCH1-204ENST00000375290 BTG1P62324 171 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 LIPKQ5VXJ0 399 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 OR2T11Q8NH01 316 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 CLEC4DQ8WXI8 215 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 ISL2Q96A47 359 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 PPIEQ9UNP9 301 aaKnown RBP9.78□□□□□ -0.84
PTCH1-204ENST00000375290 VIPP01282 170 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 SELENOWP63302 87 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 ZNF598Q86UK7 904 aaKnown RBP9.78□□□□□ -0.84
PTCH1-204ENST00000375290 LRRTM4Q86VH4 590 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 EBPLQ9BY08 206 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 HOXD1Q9GZZ0 328 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 GPR25O00155 361 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 GPRIN2O60269 458 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 RAB3AP20336 220 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 SLBPQ14493 270 aaKnown RBP eCLIP9.78□□□□□ -0.84
PTCH1-204ENST00000375290 PON2Q15165 354 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 CPZQ66K79 652 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 FAM199XQ6PEV8 388 aaPredicted RBP9.78□□□□□ -0.84
PTCH1-204ENST00000375290 IDO2Q6ZQW0 420 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 NFKBIDQ8NI38 313 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 LCN9Q8WX39 176 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 ZNF516Q92618 1163 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 PKP4Q99569 1192 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 IL12RB2Q99665 862 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 LIN28AQ9H9Z2 209 aaKnown RBP9.78□□□□□ -0.84
PTCH1-204ENST00000375290 OLAHQ9NV23 265 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 IMP3Q9NV31 184 aaKnown RBP9.78□□□□□ -0.84
PTCH1-204ENST00000375290 ERVK-19Q9WJR5 959 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 NME7Q9Y5B8 376 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 CRYBG1Q9Y4K1 1723 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 GABARAPO95166 117 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 DPEP1P16444 411 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 GABRA5P31644 462 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 VLDLRP98155 873 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 TPGS1Q6ZTW0 290 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 CNIH3Q8TBE1 160 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 C19orf43Q9BQ61 176 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 MYO5AQ9Y4I1 1855 aaKnown RBP9.78□□□□□ -0.84
PTCH1-204ENST00000375290 ADAM10O14672 748 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 RNF13O43567 381 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 ALPLP05186 524 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 TFAP2AP05549 437 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 CSN2P05814 226 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 PIM1P11309 404 aaPredicted RBP9.78□□□□□ -0.84
PTCH1-204ENST00000375290 BCKDHAP12694 445 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 CARD16Q5EG05 197 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 ZNF529Q6P280 563 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 TNFAIP8L2Q6P589 184 aaPredicted RBP9.78□□□□□ -0.84
PTCH1-204ENST00000375290 RAB11FIP2Q7L804 512 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 SGTBQ96EQ0 304 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 LRFN5Q96NI6 719 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 SUV39H2Q9H5I1 410 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 ARNT2Q9HBZ2 717 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 PADI2Q9Y2J8 665 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 CDK10Q15131 360 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 AGTRAPQ6RW13 159 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 VASH1Q7L8A9 365 aaPredicted RBP9.78□□□□□ -0.84
PTCH1-204ENST00000375290 PYROXD2Q8N2H3 581 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 ARL5AQ9Y689 179 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 LRP6O75581 1613 aa9.78□□□□□ -0.84
PTCH1-204ENST00000375290 LALBAP00709 142 aa9.77□□□□□ -0.84
PTCH1-204ENST00000375290 HSD11B1P28845 292 aa9.77□□□□□ -0.84
PTCH1-204ENST00000375290 TAS2R50P59544 299 aa9.77□□□□□ -0.84
PTCH1-204ENST00000375290 ADAD1Q96M93 576 aaKnown RBP9.77□□□□□ -0.84
PTCH1-204ENST00000375290 SORT1Q99523 831 aa9.77□□□□□ -0.84
PTCH1-204ENST00000375290 SULT4A1Q9BR01 284 aa9.77□□□□□ -0.84
PTCH1-204ENST00000375290 APMAPQ9HDC9 416 aa9.77□□□□□ -0.84
PTCH1-204ENST00000375290 SMPD4Q9NXE4 827 aa9.77□□□□□ -0.84
PTCH1-204ENST00000375290 KIF25Q9UIL4 384 aa9.77□□□□□ -0.84
PTCH1-204ENST00000375290 ARL5CA6NH57 179 aa9.77□□□□□ -0.84
PTCH1-204ENST00000375290 MSI1O43347 362 aaKnown RBP9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms