RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 NELL2Q99435 816 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 EPYCQ99645 322 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SOX17Q9H6I2 414 aaPredicted RBP17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 THSD1Q9NS62 852 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TUBA8Q9NY65 449 aaPredicted RBP17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ZNF451Q9Y4E5 1061 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SLCO1B1Q9Y6L6 691 aa17.04■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TTC28Q96AY4 2481 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 A0A0J9YY10 115 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 A0A1B0GTW7 788 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 METTL12A8MUP2 240 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 M0QX08 132 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CLIC3O95833 236 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 IL9P15248 144 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 RAD23AP54725 363 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 NR1H2P55055 460 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 PUS10Q3MIT2 529 aaKnown RBP17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ZIK1Q3SY52 487 aaPredicted RBP17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CEP68Q76N32 757 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 RNF44Q7L0R7 432 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 IQCHQ86VS3 1027 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 OFCC1Q8IZS5 231 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 METTL25Q8N6Q8 603 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 KCT2Q8NC54 265 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CADM4Q8NFZ8 388 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 BAHD1Q8TBE0 780 aaPredicted RBP17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 MOAP1Q96BY2 351 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 FCRL4Q96PJ5 515 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 BBS4Q96RK4 519 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 LRRC61Q9BV99 259 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 REEP1Q9H902 201 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 PRDM9Q9NQV7 894 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SEMA3GQ9NS98 782 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 FAM118AQ9NWS6 357 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 FBXW2Q9UKT8 454 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ENTPD4Q9Y227 616 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 U3KQV3 271 aa17.03■□□□□ 0.32
HLA-DQB1-201ENST00000374943 NINQ8N4C6 2090 aa17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 A0A1W2PR77 199 aa17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 URADA6NGE7 173 aa17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 FAM170BA6NMN3 283 aa17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 PGRMC2O15173 223 aa17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 HS6ST1O60243 411 aa17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 NDUFS2O75306 463 aa17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 PRKRAO75569 313 aaKnown RBP17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ZNF888P0CJ79 500 aaPredicted RBP17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ITGAMP11215 1152 aa17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 NCBP2P52298 156 aaKnown RBP eCLIP17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 BTN3A2P78410 334 aa17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 PPP1R8Q12972 351 aaKnown RBP17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SUZ12Q15022 739 aaKnown RBP17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 TSEN54Q7Z6J9 526 aaKnown RBP17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ARMC8Q8IUR7 673 aa17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ZNF786Q8N393 782 aa17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CAMKVQ8NCB2 501 aa17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ZNF555Q8NEP9 628 aa17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SUN3Q8TAQ9 357 aa17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 GEMIN6Q8WXD5 167 aaKnown RBP17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 CNRIP1Q96F85 164 aaPredicted RBP17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SLC35G5Q96KT7 338 aa17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ZNF347Q96SE7 839 aa17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ZFYVE21Q9BQ24 234 aa17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 AMBRA1Q9C0C7 1298 aa17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 EVA1BQ9NVM1 165 aa17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 SAMHD1Q9Y3Z3 626 aaKnown RBP17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 ORC6Q9Y5N6 252 aa17.02■□□□□ 0.32
HLA-DQB1-201ENST00000374943 HMGN4O00479 90 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 SLC16A6O15403 523 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 P2RX6O15547 441 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 DIRAS1O95057 198 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 C9P02748 559 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 OPN1SWP03999 348 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 TFPTP0C1Z6 253 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ATP6V1B1P15313 513 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 JUNDP17535 347 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 PRKACGP22612 351 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 GPC1P35052 558 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 KCNAB2Q13303 367 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 C18orf63Q68DL7 685 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ANKRD34AQ69YU3 496 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 KDM4DQ6B0I6 523 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 TNFAIP8L2Q6P589 184 aaPredicted RBP17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 OOSP2Q86WS3 158 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 SPPL2AQ8TCT8 520 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 ZDHHC1Q8WTX9 485 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 SLC38A5Q8WUX1 472 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 MUS81Q96NY9 551 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 SERINC2Q96SA4 455 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 MAPKAP1Q9BPZ7 522 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 FOXQ1Q9C009 403 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 SERHL2Q9H4I8 314 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 GIMAP4Q9NUV9 329 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 HRASLS2Q9NWW9 162 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 NDUFAF4Q9P032 175 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 PHF11Q9UIL8 331 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 PCDHGB3Q9Y5G1 929 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 TRIOO75962 3097 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 A0A0J9YVX5 310 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 OR5K3A6NET4 321 aa17.01■□□□□ 0.31
HLA-DQB1-201ENST00000374943 GLOD5A6NK44 160 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms