RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 KRT84Q9NSB2 600 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 UCKL1Q9NWZ5 548 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 THUMPD1Q9NXG2 353 aaKnown RBP14.78□□□□□ -0.04
CCDC40-202ENST00000374876 WARS2Q9UGM6 360 aaKnown RBP14.78□□□□□ -0.04
CCDC40-202ENST00000374876 PLAGL1Q9UM63 463 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 GMPPBQ9Y5P6 360 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 TRIM64BA6NI03 449 aa14.77□□□□□ -0.04
CCDC40-202ENST00000374876 C9P02748 559 aa14.77□□□□□ -0.04
CCDC40-202ENST00000374876 KELP23276 732 aa14.77□□□□□ -0.04
CCDC40-202ENST00000374876 HOXD11P31277 338 aaPredicted RBP14.77□□□□□ -0.04
CCDC40-202ENST00000374876 RXRGP48443 463 aa14.77□□□□□ -0.04
CCDC40-202ENST00000374876 KCNJ10P78508 379 aa14.77□□□□□ -0.04
CCDC40-202ENST00000374876 MC1RQ01726 317 aa14.77□□□□□ -0.04
CCDC40-202ENST00000374876 PDE7AQ13946 482 aa14.77□□□□□ -0.04
CCDC40-202ENST00000374876 TMIGD1Q6UXZ0 262 aa14.77□□□□□ -0.04
CCDC40-202ENST00000374876 C11orf96Q7Z7L8 435 aa14.77□□□□□ -0.04
CCDC40-202ENST00000374876 PDZD3Q86UT5 571 aa14.77□□□□□ -0.04
CCDC40-202ENST00000374876 AMZ2Q86W34 360 aa14.77□□□□□ -0.04
CCDC40-202ENST00000374876 METTL4Q8N3J2 472 aa14.77□□□□□ -0.04
CCDC40-202ENST00000374876 SLC25A45Q8N413 288 aa14.77□□□□□ -0.04
CCDC40-202ENST00000374876 C2orf73Q8N5S3 287 aaPredicted RBP14.77□□□□□ -0.04
CCDC40-202ENST00000374876 TTC29Q8NA56 475 aaPredicted RBP14.77□□□□□ -0.04
CCDC40-202ENST00000374876 ZNF740Q8NDX6 193 aa14.77□□□□□ -0.04
CCDC40-202ENST00000374876 OR5AR1Q8NGP9 310 aa14.77□□□□□ -0.04
CCDC40-202ENST00000374876 SAP25Q8TEE9 199 aa14.77□□□□□ -0.04
CCDC40-202ENST00000374876 ZNF566Q969W8 418 aa14.77□□□□□ -0.04
CCDC40-202ENST00000374876 CIDECQ96AQ7 238 aaPredicted RBP14.77□□□□□ -0.04
CCDC40-202ENST00000374876 C7orf34Q96L11 122 aa14.77□□□□□ -0.04
CCDC40-202ENST00000374876 DGCR6LQ9BY27 220 aa14.77□□□□□ -0.04
CCDC40-202ENST00000374876 TDRKHQ9Y2W6 561 aaKnown RBP14.77□□□□□ -0.04
CCDC40-202ENST00000374876 HSPE1-MOB4S4R3N1 261 aa14.77□□□□□ -0.04
CCDC40-202ENST00000374876 ETFAP13804 333 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 CD59P13987 128 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 NME1P15531 152 aaKnown RBP14.76□□□□□ -0.05
CCDC40-202ENST00000374876 PTX3P26022 381 aaPredicted RBP14.76□□□□□ -0.05
CCDC40-202ENST00000374876 CLK3P49761 638 aaKnown RBP14.76□□□□□ -0.05
CCDC40-202ENST00000374876 CRYBA2P53672 197 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 PLA2G16P53816 162 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 CASP9P55211 416 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 CYP2A13Q16696 494 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 RSPO4Q2I0M5 234 aaPredicted RBP14.76□□□□□ -0.05
CCDC40-202ENST00000374876 COX20Q5RI15 118 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 GTF2IRD2BQ6EKJ0 949 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 GTF2IRD2Q86UP8 949 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 KRT78Q8N1N4 520 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 SPPL2AQ8TCT8 520 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 EPYCQ99645 322 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 PADI2Q9Y2J8 665 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 PCM1Q15154 2024 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 PRSS38A1L453 326 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 XPNPEP2O43895 674 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 DPM1O60762 260 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 PIAS2O75928 621 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 CELA2BP08218 269 aaPredicted RBP14.76□□□□□ -0.05
CCDC40-202ENST00000374876 EPHA8P29322 1005 aaPredicted RBP14.76□□□□□ -0.05
CCDC40-202ENST00000374876 CHI3L1P36222 383 aaPredicted RBP14.76□□□□□ -0.05
CCDC40-202ENST00000374876 PRIM2P49643 509 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 EMP3P54852 163 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 SELENOWP63302 87 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 NFATC3Q12968 1075 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 RPA4Q13156 261 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 PRRT3Q5FWE3 981 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 GCNT6Q5T4J0 391 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 FAM71E1Q6IPT2 247 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 LCTLQ6UWM7 567 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 DCUN1D3Q8IWE4 304 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 OXR1Q8N573 874 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 OR52N2Q8NGI0 321 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 MUL1Q969V5 352 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 CAMK1GQ96NX5 476 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 ACAT2Q9BWD1 397 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 PLGRKTQ9HBL7 147 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 PAK1IP1Q9NWT1 392 aaPredicted RBP14.76□□□□□ -0.05
CCDC40-202ENST00000374876 APOBEC3BQ9UH17 382 aaKnown RBP14.76□□□□□ -0.05
CCDC40-202ENST00000374876 SLC17A4Q9Y2C5 497 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 TPRKBQ9Y3C4 175 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 NAALAD2Q9Y3Q0 740 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 PCDHGB3Q9Y5G1 929 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 PCYT1BQ9Y5K3 369 aaPredicted RBP14.76□□□□□ -0.05
CCDC40-202ENST00000374876 CEP250Q9BV73 2442 aa14.76□□□□□ -0.05
CCDC40-202ENST00000374876 M0QX08 132 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 SH3BP5O60239 455 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 DNAJB5O75953 348 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 TNFP01375 233 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 ITIH1P19827 911 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 FMO3P31513 532 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 ENTPD1P49961 510 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 MVDP53602 400 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 HNRNPKP61978 463 aaKnown RBP eCLIP14.75□□□□□ -0.05
CCDC40-202ENST00000374876 IQCCQ4KMZ1 466 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 KIAA1614Q5VZ46 1190 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 FAHD1Q6P587 224 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 TRIM40Q6P9F5 258 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 CROCCP3Q8IVE0 287 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 LMX1AQ8TE12 382 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 TFGQ92734 400 aaPredicted RBP14.75□□□□□ -0.05
CCDC40-202ENST00000374876 MTERF3Q96E29 417 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 MIEF1Q9NQG6 463 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 GPATCH2Q9NW75 528 aa14.75□□□□□ -0.05
CCDC40-202ENST00000374876 SCN3BQ9NY72 215 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms