RNA–Protein interactions for RNA: ENST00000374217.6

UBXN11-204, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-204ENST00000374217 HDDC2Q7Z4H3 204 aa14.29□□□□□ -0.12
UBXN11-204ENST00000374217 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.29□□□□□ -0.12
UBXN11-204ENST00000374217 CADM2Q8N3J6 435 aa14.29□□□□□ -0.12
UBXN11-204ENST00000374217 OR4C15Q8NGM1 316 aa14.29□□□□□ -0.12
UBXN11-204ENST00000374217 OR9Q1Q8NGQ5 310 aa14.29□□□□□ -0.12
UBXN11-204ENST00000374217 CLIP3Q96DZ5 547 aa14.29□□□□□ -0.12
UBXN11-204ENST00000374217 PANX1Q96RD7 426 aa14.29□□□□□ -0.12
UBXN11-204ENST00000374217 MYOCQ99972 504 aa14.29□□□□□ -0.12
UBXN11-204ENST00000374217 THSD1Q9NS62 852 aa14.29□□□□□ -0.12
UBXN11-204ENST00000374217 RAD18Q9NS91 495 aa14.29□□□□□ -0.12
UBXN11-204ENST00000374217 CLN6Q9NWW5 311 aa14.29□□□□□ -0.12
UBXN11-204ENST00000374217 ING3Q9NXR8 418 aa14.29□□□□□ -0.12
UBXN11-204ENST00000374217 MUTYHQ9UIF7 546 aa14.29□□□□□ -0.12
UBXN11-204ENST00000374217 FBXL21Q9UKT6 434 aa14.29□□□□□ -0.12
UBXN11-204ENST00000374217 SCN8AQ9UQD0 1980 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 ZSCAN5BA6NJL1 495 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 GPX5O75715 221 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 HLA-DQB1P01920 261 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 HSMCR30P0CW71 290 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 SDC1P18827 310 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 KIR2DL1P43626 348 aaPredicted RBP14.28□□□□□ -0.12
UBXN11-204ENST00000374217 CDKN1CP49918 316 aaPredicted RBP14.28□□□□□ -0.12
UBXN11-204ENST00000374217 HSPA14Q0VDF9 509 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 MED22Q15528 200 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 MLF2Q15773 248 aaPredicted RBP14.28□□□□□ -0.12
UBXN11-204ENST00000374217 BAK1Q16611 211 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 MICAQ29983 383 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 C18orf21Q32NC0 220 aaPredicted RBP14.28□□□□□ -0.12
UBXN11-204ENST00000374217 SOWAHCQ53LP3 525 aaPredicted RBP14.28□□□□□ -0.12
UBXN11-204ENST00000374217 IER5LQ5T953 404 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 LYPLAL1Q5VWZ2 237 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 BRAT1Q6PJG6 821 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 ZNF852Q6ZMS4 543 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 LRRC70Q7Z2Q7 622 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 RAVER1Q8IY67 606 aaKnown RBP14.28□□□□□ -0.12
UBXN11-204ENST00000374217 LSM14AQ8ND56 463 aaKnown RBP14.28□□□□□ -0.12
UBXN11-204ENST00000374217 GPR151Q8TDV0 419 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 PIH1D2Q8WWB5 315 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 CCM2Q9BSQ5 444 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 SARS2Q9NP81 518 aaKnown RBP14.28□□□□□ -0.12
UBXN11-204ENST00000374217 FARSBQ9NSD9 589 aaKnown RBP14.28□□□□□ -0.12
UBXN11-204ENST00000374217 MS4A12Q9NXJ0 267 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 SH3BP4Q9P0V3 963 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 KLHL42Q9P2K6 505 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 CA14Q9ULX7 337 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 PPT2Q9UMR5 302 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 NDRG2Q9UN36 371 aaKnown RBP14.28□□□□□ -0.12
UBXN11-204ENST00000374217 DLGAP4Q9Y2H0 992 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 PCDHB11Q9Y5F2 797 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 SNX8Q9Y5X2 465 aa14.28□□□□□ -0.12
UBXN11-204ENST00000374217 HYKKA2RU49 373 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 PRR23AA6NEV1 266 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 ANTXRLA6NF34 631 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 NOS1APO75052 506 aaPredicted RBP14.27□□□□□ -0.12
UBXN11-204ENST00000374217 STK16O75716 305 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 CCNB2O95067 398 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 CBSLP0DN79 551 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 ACADMP11310 421 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 NAT1P18440 290 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 POLR2CP19387 275 aaPredicted RBP14.27□□□□□ -0.12
UBXN11-204ENST00000374217 NTSR1P30989 418 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 CSTF2P33240 577 aaKnown RBP eCLIP14.27□□□□□ -0.12
UBXN11-204ENST00000374217 CBSP35520 551 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 IDH2P48735 452 aaKnown RBP14.27□□□□□ -0.12
UBXN11-204ENST00000374217 SLC14A1Q13336 389 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 SSX1Q16384 188 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 Q5BKY6 102 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 ZNF805Q5CZA5 627 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 PDZK1Q5T2W1 519 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 PTRHD1Q6GMV3 140 aaKnown RBP14.27□□□□□ -0.12
UBXN11-204ENST00000374217 ZNF782Q6ZMW2 699 aaPredicted RBP14.27□□□□□ -0.12
UBXN11-204ENST00000374217 USP45Q70EL2 814 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 TMIEQ8NEW7 156 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 ENKURQ8TC29 256 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 AP2M1Q96CW1 435 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 PPP1R16AQ96I34 528 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 OPALINQ96PE5 141 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 GPR63Q9BZJ6 419 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 TRIM39Q9HCM9 518 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 PRSS16Q9NQE7 514 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 GPRC5BQ9NZH0 403 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 NUFIP1Q9UHK0 495 aaKnown RBP14.27□□□□□ -0.12
UBXN11-204ENST00000374217 HCN2Q9UL51 889 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 BOLA1Q9Y3E2 137 aa14.27□□□□□ -0.12
UBXN11-204ENST00000374217 CFAP20Q9Y6A4 193 aaKnown RBP14.27□□□□□ -0.12
UBXN11-204ENST00000374217 COL4A2P08572 1712 aa14.27□□□□□ -0.13
UBXN11-204ENST00000374217 C1QTNF3-AMACRE9PGA6 284 aa14.27□□□□□ -0.13
UBXN11-204ENST00000374217 KLF8O95600 359 aaPredicted RBP14.27□□□□□ -0.13
UBXN11-204ENST00000374217 TRBC1P01850 177 aa14.27□□□□□ -0.13
UBXN11-204ENST00000374217 CTSLP07711 333 aa14.27□□□□□ -0.13
UBXN11-204ENST00000374217 ALPIP09923 528 aa14.27□□□□□ -0.13
UBXN11-204ENST00000374217 UBL4AP11441 157 aa14.27□□□□□ -0.13
UBXN11-204ENST00000374217 RPS19P39019 145 aaKnown RBP14.27□□□□□ -0.13
UBXN11-204ENST00000374217 SELENOWP63302 87 aa14.27□□□□□ -0.13
UBXN11-204ENST00000374217 MRPS21P82921 87 aaKnown RBP14.27□□□□□ -0.13
UBXN11-204ENST00000374217 EFR3AQ14156 821 aa14.27□□□□□ -0.13
UBXN11-204ENST00000374217 LARS2Q15031 903 aaKnown RBP14.27□□□□□ -0.13
UBXN11-204ENST00000374217 POM121L1PQ3SYA9 428 aa14.27□□□□□ -0.13
UBXN11-204ENST00000374217 MZT2BQ6NZ67 158 aa14.27□□□□□ -0.13
UBXN11-204ENST00000374217 METAP1DQ6UB28 335 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms