RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 ZFP3Q96NJ6 502 aa11.09□□□□□ -0.63
HDAC8-204ENST00000373560 BIRC8Q96P09 236 aa11.09□□□□□ -0.63
HDAC8-204ENST00000373560 GNRHR2Q96P88 292 aa11.09□□□□□ -0.63
HDAC8-204ENST00000373560 CSF3RQ99062 836 aa11.09□□□□□ -0.63
HDAC8-204ENST00000373560 MANSC1Q9H8J5 431 aa11.09□□□□□ -0.63
HDAC8-204ENST00000373560 PRTFDC1Q9NRG1 225 aa11.09□□□□□ -0.63
HDAC8-204ENST00000373560 FAM114A2Q9NRY5 505 aa11.09□□□□□ -0.63
HDAC8-204ENST00000373560 HEY2Q9UBP5 337 aa11.09□□□□□ -0.63
HDAC8-204ENST00000373560 ALPK2Q86TB3 2170 aa11.09□□□□□ -0.63
HDAC8-204ENST00000373560 CATP04040 527 aaKnown RBP11.08□□□□□ -0.64
HDAC8-204ENST00000373560 ATP5DP30049 168 aa11.08□□□□□ -0.64
HDAC8-204ENST00000373560 GRIA1P42261 906 aa11.08□□□□□ -0.64
HDAC8-204ENST00000373560 CCZ1BP86790 482 aa11.08□□□□□ -0.64
HDAC8-204ENST00000373560 CCZ1P86791 482 aaPredicted RBP11.08□□□□□ -0.64
HDAC8-204ENST00000373560 ELAVL1Q15717 326 aaKnown RBP11.08□□□□□ -0.64
HDAC8-204ENST00000373560 ODF2Q5BJF6 829 aa11.08□□□□□ -0.64
HDAC8-204ENST00000373560 CYB5R2Q6BCY4 276 aa11.08□□□□□ -0.64
HDAC8-204ENST00000373560 SBSNQ6UWP8 590 aa11.08□□□□□ -0.64
HDAC8-204ENST00000373560 YRDCQ86U90 279 aaKnown RBP11.08□□□□□ -0.64
HDAC8-204ENST00000373560 REXO1L1PQ8IX06 675 aa11.08□□□□□ -0.64
HDAC8-204ENST00000373560 C9orf40Q8IXQ3 194 aa11.08□□□□□ -0.64
HDAC8-204ENST00000373560 OR10H5Q8NGA6 315 aa11.08□□□□□ -0.64
HDAC8-204ENST00000373560 GIMAP7Q8NHV1 300 aa11.08□□□□□ -0.64
HDAC8-204ENST00000373560 ACTL9Q8TC94 416 aa11.08□□□□□ -0.64
HDAC8-204ENST00000373560 NT5CQ8TCD5 201 aa11.08□□□□□ -0.64
HDAC8-204ENST00000373560 ATL1Q8WXF7 558 aa11.08□□□□□ -0.64
HDAC8-204ENST00000373560 HTRA1Q92743 480 aa11.08□□□□□ -0.64
HDAC8-204ENST00000373560 TTC1Q99614 292 aa11.08□□□□□ -0.64
HDAC8-204ENST00000373560 TM9SF2Q99805 663 aa11.08□□□□□ -0.64
HDAC8-204ENST00000373560 RHNO1Q9BSD3 238 aa11.08□□□□□ -0.64
HDAC8-204ENST00000373560 GOLPH3Q9H4A6 298 aa11.08□□□□□ -0.64
HDAC8-204ENST00000373560 CCDC177Q9NQR7 707 aaPredicted RBP11.08□□□□□ -0.64
HDAC8-204ENST00000373560 CATSPERZQ9NTU4 200 aa11.08□□□□□ -0.64
HDAC8-204ENST00000373560 DDX56Q9NY93 547 aaKnown RBP11.08□□□□□ -0.64
HDAC8-204ENST00000373560 MAPRE3Q9UPY8 281 aa11.08□□□□□ -0.64
HDAC8-204ENST00000373560 C15orf41Q9Y2V0 281 aa11.08□□□□□ -0.64
HDAC8-204ENST00000373560 FRG2CA6NGY1 282 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 ZNF839A8K0R7 811 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 H0Y3Z8 333 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 C16orf97H3BN30 126 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 OR1F1O43749 312 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 AVILO75366 819 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 ETHE1O95571 254 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 IFNA16P05015 189 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 H2AFZP0C0S5 128 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 SMIM10L1P0DMW3 83 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 PTNP21246 168 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 COMTP21964 271 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 RPS3P23396 243 aaKnown RBP eCLIP11.07□□□□□ -0.64
HDAC8-204ENST00000373560 CTNNA2P26232 953 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 FMO4P31512 558 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 SIRPAP78324 504 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 CUL1Q13616 776 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 SF3B4Q15427 424 aaKnown RBP eCLIP11.07□□□□□ -0.64
HDAC8-204ENST00000373560 PGGHGQ32M88 737 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 H2AFVQ71UI9 128 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 ATG4DQ86TL0 474 aaPredicted RBP11.07□□□□□ -0.64
HDAC8-204ENST00000373560 C3orf56Q8N813 242 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 CNEP1R1Q8N9A8 125 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 SEMA6DQ8NFY4 1073 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 SLC35G2Q8TBE7 412 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 DOK4Q8TEW6 326 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 ZNF721Q8TF20 911 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 PGM2Q96G03 612 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 SMIM10Q96HG1 83 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 LRRC40Q9H9A6 602 aa11.07□□□□□ -0.64
HDAC8-204ENST00000373560 A0A1W2PNR3 127 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 MACROD2A1Z1Q3 448 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 GRID2IPA4D2P6 1211 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 HRKO00198 91 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 CGAP01215 116 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 CD8AP01732 235 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 SERPING1P05155 500 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 HSD17B2P37059 387 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 SKIV2L2P42285 1042 aaKnown RBP11.06□□□□□ -0.64
HDAC8-204ENST00000373560 KIR2DL2P43627 348 aaPredicted RBP11.06□□□□□ -0.64
HDAC8-204ENST00000373560 PCYT1AP49585 367 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 STARP49675 285 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 COMPP49747 757 aaPredicted RBP11.06□□□□□ -0.64
HDAC8-204ENST00000373560 UBE2HP62256 183 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 PRAMEP78395 509 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 MYL5Q02045 173 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 SLC13A2Q13183 592 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 TOMM20Q15388 145 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 PDCD2Q16342 344 aaPredicted RBP11.06□□□□□ -0.64
HDAC8-204ENST00000373560 TMEM64Q6YI46 380 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 BBS12Q6ZW61 710 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 CAND1Q86VP6 1230 aaKnown RBP11.06□□□□□ -0.64
HDAC8-204ENST00000373560 C17orf64Q86WR6 236 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 WFDC8Q8IUA0 241 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 TMEM132CQ8N3T6 1108 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 RFLNBQ8N5W9 214 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 ANKRD53Q8N9V6 530 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 ZNF610Q8N9Z0 462 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 FAM83FQ8NEG4 500 aaPredicted RBP11.06□□□□□ -0.64
HDAC8-204ENST00000373560 OR8K1Q8NGG5 319 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 OR8K3Q8NH51 312 aa11.06□□□□□ -0.64
HDAC8-204ENST00000373560 CTNNBL1Q8WYA6 563 aaPredicted RBP11.06□□□□□ -0.64
HDAC8-204ENST00000373560 ALKBH8Q96BT7 664 aaKnown RBP11.06□□□□□ -0.64
HDAC8-204ENST00000373560 CTHRC1Q96CG8 243 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms