RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 GCGRP47871 477 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 GDI2P50395 445 aaKnown RBP10.96□□□□□ -0.66
PTPRF-203ENST00000372407 ZNF81P51508 661 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 CCBE1Q6UXH8 406 aaPredicted RBP10.96□□□□□ -0.66
PTPRF-203ENST00000372407 LHFPL3Q86UP9 236 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 C12orf40Q86WS4 652 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 PIAS4Q8N2W9 510 aaPredicted RBP10.96□□□□□ -0.66
PTPRF-203ENST00000372407 OR4K17Q8NGC6 315 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 OR51A7Q8NH64 312 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 MYH13Q9UKX3 1938 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 TRAV6A0A075B6T7 132 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 NOTOA8MTQ0 251 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 CAPN14A8MX76 684 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 SOCS2O14508 198 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 FHP07954 510 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 ZNF806P0C7X5 589 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 T-ENOLP0DO92 83 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 AGXTP21549 392 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 GSTM2P28161 218 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 SOX2P48431 317 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 HK3P52790 923 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 ID2Q02363 134 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 PM20D1Q6GTS8 502 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 CCSAPQ6IQ19 270 aaPredicted RBP10.96□□□□□ -0.66
PTPRF-203ENST00000372407 ACBD7Q8N6N7 88 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 SETD7Q8WTS6 366 aaKnown RBP10.96□□□□□ -0.66
PTPRF-203ENST00000372407 FUBP1Q96AE4 644 aaKnown RBP10.96□□□□□ -0.66
PTPRF-203ENST00000372407 HSPA12BQ96MM6 686 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 GTPBP2Q9BX10 602 aaKnown RBP10.96□□□□□ -0.66
PTPRF-203ENST00000372407 RNF38Q9H0F5 515 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 TREM1Q9NP99 234 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 PCTPQ9UKL6 214 aa10.96□□□□□ -0.66
PTPRF-203ENST00000372407 ANKRD36CQ5JPF3 1778 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 MYH8P13535 1937 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 A0A1B0GVT2 93 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 KIAA0513O60268 411 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 APOL3O95236 402 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 GSRP00390 522 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 PENKP01210 267 aaPredicted RBP10.95□□□□□ -0.66
PTPRF-203ENST00000372407 GGT1P19440 569 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 ERP29P30040 261 aaKnown RBP10.95□□□□□ -0.66
PTPRF-203ENST00000372407 PYCR1P32322 319 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 STT3AP46977 705 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 ACTC1P68032 377 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 ACTA1P68133 377 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 NFATC3Q12968 1075 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 TRAM1Q15629 374 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 ODF4Q2M2E3 257 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 RPL13AP3Q6NVV1 102 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 KCTD18Q6PI47 426 aaPredicted RBP10.95□□□□□ -0.66
PTPRF-203ENST00000372407 HCAR2Q8TDS4 363 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 TMEM41AQ96HV5 264 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 AIFM2Q9BRQ8 373 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.95□□□□□ -0.66
PTPRF-203ENST00000372407 OR8D2Q9GZM6 311 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 SMG9Q9H0W8 520 aaKnown RBP10.95□□□□□ -0.66
PTPRF-203ENST00000372407 SPHK2Q9NRA0 654 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 SLCO3A1Q9UIG8 710 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 MAB21L2Q9Y586 359 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 BAZ2AQ9UIF9 1905 aaKnown RBP10.95□□□□□ -0.66
PTPRF-203ENST00000372407 TEX13DA0A0J9YY54 714 aaPredicted RBP10.95□□□□□ -0.66
PTPRF-203ENST00000372407 A0A1B0GVI7 797 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 M0R233 179 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 EMC8O43402 210 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 CYBAP13498 195 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 PVALBP20472 110 aaPredicted RBP10.95□□□□□ -0.66
PTPRF-203ENST00000372407 HOXA11P31270 313 aaPredicted RBP10.95□□□□□ -0.66
PTPRF-203ENST00000372407 WNT7BP56706 349 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 RCAN2Q14206 197 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 SPRED3Q2MJR0 410 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 FLYWCH1Q4VC44 716 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 MLIPQ5VWP3 458 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 RAB12Q6IQ22 244 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 UBE2Q1Q7Z7E8 422 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 TEX26Q8N6G2 289 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 ASCC1Q8N9N2 400 aaKnown RBP10.95□□□□□ -0.66
PTPRF-203ENST00000372407 C17orf50Q8WW18 174 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 ABCG5Q9H222 651 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 XKR8Q9H6D3 395 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 TLR9Q9NR96 1032 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 EIF3FO00303 357 aaPredicted RBP10.95□□□□□ -0.66
PTPRF-203ENST00000372407 SOX1O00570 391 aaPredicted RBP10.95□□□□□ -0.66
PTPRF-203ENST00000372407 KHNYNO15037 678 aaKnown RBP10.95□□□□□ -0.66
PTPRF-203ENST00000372407 VEGFDO43915 354 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 RBBP9O75884 186 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 FGF4P08620 206 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 CLUP10909 449 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 CAPN3P20807 821 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 KCNC1P48547 511 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 HTR6P50406 440 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 TBPL1P62380 186 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 MS4A2Q01362 244 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 TSC22D1Q15714 1073 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 ARHGAP40Q5TG30 622 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 MSANTD1Q6ZTZ1 278 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 FOXRED2Q8IWF2 684 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 Q8N402 240 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 TMEM156Q8N614 296 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 RPLP0P6Q8NHW5 317 aa10.95□□□□□ -0.66
PTPRF-203ENST00000372407 FANK1Q8TC84 345 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms