RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 TTC19Q6DKK2 380 aaPredicted RBP17.54■□□□□ 0.4
TMEM53-201ENST00000372235 ARHGAP11AQ6P4F7 1023 aa17.54■□□□□ 0.4
TMEM53-201ENST00000372235 IL20RBQ6UXL0 311 aa17.54■□□□□ 0.4
TMEM53-201ENST00000372235 PAGE2Q7Z2X7 111 aa17.54■□□□□ 0.4
TMEM53-201ENST00000372235 LCA5Q86VQ0 697 aa17.54■□□□□ 0.4
TMEM53-201ENST00000372235 NUDT13Q86X67 352 aa17.54■□□□□ 0.4
TMEM53-201ENST00000372235 TICAM1Q8IUC6 712 aa17.54■□□□□ 0.4
TMEM53-201ENST00000372235 ST13P4Q8IZP2 240 aaPredicted RBP17.54■□□□□ 0.4
TMEM53-201ENST00000372235 SLC22A8Q8TCC7 542 aa17.54■□□□□ 0.4
TMEM53-201ENST00000372235 ANKRD9Q96BM1 317 aaPredicted RBP17.54■□□□□ 0.4
TMEM53-201ENST00000372235 SCYL1Q96KG9 808 aa17.54■□□□□ 0.4
TMEM53-201ENST00000372235 NTMT1Q9BV86 223 aa17.54■□□□□ 0.4
TMEM53-201ENST00000372235 TSPAN10Q9H1Z9 355 aaPredicted RBP17.54■□□□□ 0.4
TMEM53-201ENST00000372235 TINAGQ9UJW2 476 aa17.54■□□□□ 0.4
TMEM53-201ENST00000372235 PROM1O43490 865 aa17.53■□□□□ 0.4
TMEM53-201ENST00000372235 GUCY1B2O75343 617 aa17.53■□□□□ 0.4
TMEM53-201ENST00000372235 ALOX15P16050 662 aaPredicted RBP17.53■□□□□ 0.4
TMEM53-201ENST00000372235 PTGS2P35354 604 aa17.53■□□□□ 0.4
TMEM53-201ENST00000372235 PTGER4P35408 488 aa17.53■□□□□ 0.4
TMEM53-201ENST00000372235 ST13P50502 369 aaKnown RBP17.53■□□□□ 0.4
TMEM53-201ENST00000372235 HK2P52789 917 aa17.53■□□□□ 0.4
TMEM53-201ENST00000372235 RPS13P62277 151 aaKnown RBP17.53■□□□□ 0.4
TMEM53-201ENST00000372235 IFT88Q13099 833 aa17.53■□□□□ 0.4
TMEM53-201ENST00000372235 ZNF630Q2M218 657 aaPredicted RBP17.53■□□□□ 0.4
TMEM53-201ENST00000372235 TMEM211Q6ICI0 200 aa17.53■□□□□ 0.4
TMEM53-201ENST00000372235 SLC22A16Q86VW1 577 aa17.53■□□□□ 0.4
TMEM53-201ENST00000372235 CEP112Q8N8E3 955 aa17.53■□□□□ 0.4
TMEM53-201ENST00000372235 KIF18AQ8NI77 898 aa17.53■□□□□ 0.4
TMEM53-201ENST00000372235 WDR20Q8TBZ3 569 aa17.53■□□□□ 0.4
TMEM53-201ENST00000372235 MARVELD3Q96A59 401 aa17.53■□□□□ 0.4
TMEM53-201ENST00000372235 MTBPQ96DY7 904 aa17.53■□□□□ 0.4
TMEM53-201ENST00000372235 SENP5Q96HI0 755 aaPredicted RBP17.53■□□□□ 0.4
TMEM53-201ENST00000372235 MRPL57Q9BQC6 102 aaKnown RBP17.53■□□□□ 0.4
TMEM53-201ENST00000372235 FAM173AQ9BQD7 235 aa17.53■□□□□ 0.4
TMEM53-201ENST00000372235 MRPL46Q9H2W6 279 aaKnown RBP17.53■□□□□ 0.4
TMEM53-201ENST00000372235 NOL11Q9H8H0 719 aaKnown RBP17.53■□□□□ 0.4
TMEM53-201ENST00000372235 NMRK1Q9NWW6 199 aa17.53■□□□□ 0.4
TMEM53-201ENST00000372235 COQ3Q9NZJ6 369 aa17.53■□□□□ 0.4
TMEM53-201ENST00000372235 DMGDHQ9UI17 866 aaKnown RBP17.53■□□□□ 0.4
TMEM53-201ENST00000372235 ADAM29Q9UKF5 820 aa17.53■□□□□ 0.4
TMEM53-201ENST00000372235 IQANK1A0A1B0GTG1 560 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 ARHGAP10A1A4S6 786 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 TMEM200CA6NKL6 621 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 OR6C76A6NM76 312 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 WWP2O00308 870 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 FGF17O60258 216 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 OR10H2O60403 315 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 SH3BGRLO75368 114 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 GPR75O95800 540 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 P04436 131 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 SNRPAP09012 282 aaKnown RBP17.52■□□□□ 0.4
TMEM53-201ENST00000372235 FAM58BPP0C7Q3 252 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 NR2F6P10588 404 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 CNR1P21554 472 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 HTR1EP28566 365 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 PLGLB1Q02325 96 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 FOLH1Q04609 750 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 GGTA1PQ4G0N0 100 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 SLC29A4Q7RTT9 530 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 MDGA2Q7Z553 956 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 PTGR2Q8N8N7 351 aaPredicted RBP17.52■□□□□ 0.4
TMEM53-201ENST00000372235 MYRIPQ8NFW9 859 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 ZNF721Q8TF20 911 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 AGAP11Q8TF27 550 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 FBXL20Q96IG2 436 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 SACM1LQ9NTJ5 587 aa17.52■□□□□ 0.4
TMEM53-201ENST00000372235 DIDO1Q9BTC0 2240 aaKnown RBP17.52■□□□□ 0.39
TMEM53-201ENST00000372235 CROCCQ5TZA2 2017 aa17.52■□□□□ 0.39
TMEM53-201ENST00000372235 A0A0A6YYD5 115 aa17.51■□□□□ 0.39
TMEM53-201ENST00000372235 ENO4A6NNW6 628 aa17.51■□□□□ 0.39
TMEM53-201ENST00000372235 POC1B-GALNT4F8VUJ3 575 aa17.51■□□□□ 0.39
TMEM53-201ENST00000372235 PRKNO60260 465 aaPredicted RBP17.51■□□□□ 0.39
TMEM53-201ENST00000372235 OR6B1O95007 311 aa17.51■□□□□ 0.39
TMEM53-201ENST00000372235 CLDN14O95500 239 aa17.51■□□□□ 0.39
TMEM53-201ENST00000372235 OTCP00480 354 aa17.51■□□□□ 0.39
TMEM53-201ENST00000372235 SOX3P41225 446 aa17.51■□□□□ 0.39
TMEM53-201ENST00000372235 SPRED3Q2MJR0 410 aa17.51■□□□□ 0.39
TMEM53-201ENST00000372235 PIGGQ5H8A4 983 aa17.51■□□□□ 0.39
TMEM53-201ENST00000372235 FRG2Q64ET8 278 aa17.51■□□□□ 0.39
TMEM53-201ENST00000372235 OR52E8Q6IFG1 317 aa17.51■□□□□ 0.39
TMEM53-201ENST00000372235 MRM1Q6IN84 353 aaKnown RBP17.51■□□□□ 0.39
TMEM53-201ENST00000372235 TRMT10CQ7L0Y3 403 aaKnown RBP17.51■□□□□ 0.39
TMEM53-201ENST00000372235 IFT20Q8IY31 132 aa17.51■□□□□ 0.39
TMEM53-201ENST00000372235 FAM57AQ8TBR7 257 aa17.51■□□□□ 0.39
TMEM53-201ENST00000372235 PHF21BQ96EK2 531 aa17.51■□□□□ 0.39
TMEM53-201ENST00000372235 FRG2BQ96QU4 278 aa17.51■□□□□ 0.39
TMEM53-201ENST00000372235 ELOVL6Q9H5J4 265 aa17.51■□□□□ 0.39
TMEM53-201ENST00000372235 XPR1Q9UBH6 696 aa17.51■□□□□ 0.39
TMEM53-201ENST00000372235 RNF11Q9Y3C5 154 aa17.51■□□□□ 0.39
TMEM53-201ENST00000372235 ATG4BQ9Y4P1 393 aa17.51■□□□□ 0.39
TMEM53-201ENST00000372235 EXOC1LA0A1B0GW35 172 aa17.5■□□□□ 0.39
TMEM53-201ENST00000372235 CAPN14A8MX76 684 aa17.5■□□□□ 0.39
TMEM53-201ENST00000372235 HS6ST1O60243 411 aa17.5■□□□□ 0.39
TMEM53-201ENST00000372235 CDC40O60508 579 aaKnown RBP eCLIP17.5■□□□□ 0.39
TMEM53-201ENST00000372235 SIX3O95343 332 aaPredicted RBP17.5■□□□□ 0.39
TMEM53-201ENST00000372235 ETHE1O95571 254 aa17.5■□□□□ 0.39
TMEM53-201ENST00000372235 IGKV3-11P04433 115 aa17.5■□□□□ 0.39
TMEM53-201ENST00000372235 ABHD2P08910 425 aa17.5■□□□□ 0.39
TMEM53-201ENST00000372235 SLC35E2P0CK97 266 aa17.5■□□□□ 0.39
TMEM53-201ENST00000372235 TAC1P20366 129 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms