RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 ZC3H7AQ8IWR0 971 aaKnown RBP13.37□□□□□ -0.27
LDB3-204ENST00000372066 TBC1D3Q8IZP1 549 aaPredicted RBP13.37□□□□□ -0.27
LDB3-204ENST00000372066 OR2L8Q8NGY9 312 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 LZICQ8WZA0 190 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 NMD3Q96D46 503 aaKnown RBP13.37□□□□□ -0.27
LDB3-204ENST00000372066 MAGED4Q96JG8 741 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 C12orf66Q96MD2 445 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 EPYCQ99645 322 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 SH3GL3Q99963 347 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 DOHHQ9BU89 302 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 SLC17A9Q9BYT1 436 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 APC2O95996 2303 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 FASNP49327 2511 aaKnown RBP13.37□□□□□ -0.27
LDB3-204ENST00000372066 LAMA5O15230 3695 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 A0A1W2PPV9 198 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 A0A1W2PR77 199 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 TRBC2A0A5B9 178 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 PLPP1O14494 284 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 RNGTTO60942 597 aaKnown RBP13.37□□□□□ -0.27
LDB3-204ENST00000372066 CPNE6O95741 557 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 C9P02748 559 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 IL3P08700 152 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 ACP5P13686 325 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 DDCP20711 480 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 SHMT2P34897 504 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 MVDP53602 400 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 MAPK12P53778 367 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 IST1P53990 364 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 KEAP1Q14145 624 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 FGL2Q14314 439 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 SHBQ15464 509 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 TMEM35AQ53FP2 167 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 ZNF691Q5VV52 312 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 CHST15Q7LFX5 561 aaPredicted RBP13.37□□□□□ -0.27
LDB3-204ENST00000372066 TMEM179BQ7Z7N9 219 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 ERI1Q8IV48 349 aaKnown RBP13.37□□□□□ -0.27
LDB3-204ENST00000372066 TBC1D19Q8N5T2 526 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 EID2Q8N6I1 236 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 ZNF740Q8NDX6 193 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 PIK3C3Q8NEB9 887 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 DENND6BQ8NEG7 585 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 SAP25Q8TEE9 199 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 OR5P2Q8WZ92 322 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 ZNF566Q969W8 418 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 RGMAQ96B86 450 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 SCARF2Q96GP6 870 aaPredicted RBP13.37□□□□□ -0.27
LDB3-204ENST00000372066 FERD3LQ96RJ6 166 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 ZNF347Q96SE7 839 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 DPH2Q9BQC3 489 aaPredicted RBP13.37□□□□□ -0.27
LDB3-204ENST00000372066 NPLQ9BXD5 320 aaPredicted RBP13.37□□□□□ -0.27
LDB3-204ENST00000372066 AMBRA1Q9C0C7 1298 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 SLC24A3Q9HC58 644 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 NEUROD4Q9HD90 331 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 TMEM9Q9P0T7 183 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 TMEFF2Q9UIK5 374 aaPredicted RBP13.37□□□□□ -0.27
LDB3-204ENST00000372066 ABCG2Q9UNQ0 655 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 ANGPT4Q9Y264 503 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 OR1A2Q9Y585 309 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 PCDHGA1Q9Y5H4 931 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 MAGED1Q9Y5V3 778 aaPredicted RBP13.37□□□□□ -0.27
LDB3-204ENST00000372066 ACACAQ13085 2346 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 LOC100130705A0A1B0GUX0 176 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 A0A1W2PQU0 124 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 TLR4O00206 839 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 SAP18O00422 153 aaKnown RBP13.36□□□□□ -0.27
LDB3-204ENST00000372066 ADAMDEC1O15204 470 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 YKT6O15498 198 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 NDUFS4O43181 175 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 ABCB7O75027 752 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 DNAJB5O75953 348 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 KLHL18O94889 574 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 PAK4O96013 591 aaPredicted RBP13.36□□□□□ -0.27
LDB3-204ENST00000372066 CEACAM5P06731 702 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 CCDC159P0C7I6 412 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 ARAFP10398 606 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 ETS2P15036 469 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 ITGA2P17301 1181 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 IGFALSP35858 605 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 CHI3L1P36222 383 aaPredicted RBP13.36□□□□□ -0.27
LDB3-204ENST00000372066 CRATP43155 626 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 MAGEA8P43361 318 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 ARRB1P49407 418 aaPredicted RBP13.36□□□□□ -0.27
LDB3-204ENST00000372066 ADPRHP54922 357 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 CLDN6P56747 220 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 KIAA1024LP59773 190 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 SELENOWP63302 87 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 VLDLRP98155 873 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 PRDX1Q06830 199 aaKnown RBP13.36□□□□□ -0.27
LDB3-204ENST00000372066 TUBA3CQ13748 450 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 PLCL1Q15111 1095 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 C11orf91Q3C1V1 193 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.36□□□□□ -0.27
LDB3-204ENST00000372066 KDM4DQ6B0I6 523 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 NAGSQ8N159 534 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 FBLIM1Q8WUP2 373 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 MPP4Q96JB8 637 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 DCBLD2Q96PD2 775 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 INSM2Q96T92 566 aaPredicted RBP13.36□□□□□ -0.27
LDB3-204ENST00000372066 APOOQ9BUR5 198 aa13.36□□□□□ -0.27
LDB3-204ENST00000372066 ZNF717Q9BY31 904 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms