RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 OR4N5Q8IXE1 308 aa13.89□□□□□ -0.19
COL9A1-204ENST00000370496 LSM14AQ8ND56 463 aaKnown RBP13.89□□□□□ -0.19
COL9A1-204ENST00000370496 C7orf57Q8NEG2 295 aa13.89□□□□□ -0.19
COL9A1-204ENST00000370496 OR2T11Q8NH01 316 aa13.89□□□□□ -0.19
COL9A1-204ENST00000370496 SLC39A7Q92504 469 aa13.89□□□□□ -0.19
COL9A1-204ENST00000370496 DGAT2Q96PD7 388 aa13.89□□□□□ -0.19
COL9A1-204ENST00000370496 ALOXE3Q9BYJ1 711 aa13.89□□□□□ -0.19
COL9A1-204ENST00000370496 ILKAPQ9H0C8 392 aaPredicted RBP13.89□□□□□ -0.19
COL9A1-204ENST00000370496 ZNF395Q9H8N7 513 aaPredicted RBP13.89□□□□□ -0.19
COL9A1-204ENST00000370496 PFDN4Q9NQP4 134 aa13.89□□□□□ -0.19
COL9A1-204ENST00000370496 ZNF71Q9NQZ8 489 aaPredicted RBP13.89□□□□□ -0.19
COL9A1-204ENST00000370496 C1orf109Q9NX04 203 aa13.89□□□□□ -0.19
COL9A1-204ENST00000370496 TNRC6AQ8NDV7 1962 aaKnown RBP13.89□□□□□ -0.19
COL9A1-204ENST00000370496 C1orf226A1L170 272 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 OR10H2O60403 315 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 IL3P08700 152 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 NR1D1P20393 614 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 PRPH2P23942 346 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 GSTM5P46439 218 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 SOX8P57073 446 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 TAS2R50P59544 299 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 PPP2R2AP63151 447 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 HSP90B2PQ58FF3 399 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 AGAP7PQ5VUJ5 663 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 TCTN3Q6NUS6 607 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 GALNT18Q6P9A2 607 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 ATG14Q6ZNE5 492 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 BRIX1Q8TDN6 353 aaKnown RBP13.88□□□□□ -0.19
COL9A1-204ENST00000370496 ANKRD9Q96BM1 317 aaPredicted RBP13.88□□□□□ -0.19
COL9A1-204ENST00000370496 KLHL29Q96CT2 875 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 C19orf60Q96EN9 201 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 IMMP1LQ96LU5 166 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 AGAP4Q96P64 663 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 BBC3Q96PG8 261 aaPredicted RBP13.88□□□□□ -0.19
COL9A1-204ENST00000370496 SORT1Q99523 831 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 PELOQ9BRX2 385 aaKnown RBP13.88□□□□□ -0.19
COL9A1-204ENST00000370496 SLC25A18Q9H1K4 315 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 MANSC1Q9H8J5 431 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 ZNF451Q9Y4E5 1061 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 CLDN16Q9Y5I7 305 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 CLCA3PQ9Y6N3 262 aa13.88□□□□□ -0.19
COL9A1-204ENST00000370496 C17orf105B2RV13 164 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 LSM1O15116 133 aaKnown RBP13.87□□□□□ -0.19
COL9A1-204ENST00000370496 DYRK3O43781 588 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 ITGAMP11215 1152 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 TNNI3P19429 210 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 PIK3R1P27986 724 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 RPL14P50914 215 aaKnown RBP13.87□□□□□ -0.19
COL9A1-204ENST00000370496 UGT3A2Q3SY77 523 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 ATP6AP1LQ52LC2 224 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 XKR7Q5GH72 579 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 JMJD6Q6NYC1 403 aaPredicted RBP13.87□□□□□ -0.19
COL9A1-204ENST00000370496 ASB18Q6ZVZ8 466 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 CPAMD8Q8IZJ3 1885 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 MMP21Q8N119 569 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 TMEM132CQ8N3T6 1108 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 SIRT6Q8N6T7 355 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 OR14A16Q8NHC5 309 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 FAM76AQ8TAV0 307 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 M1APQ8TC57 530 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 C16orf78Q8WTQ4 265 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 DAZLQ92904 295 aaKnown RBP13.87□□□□□ -0.19
COL9A1-204ENST00000370496 DOCK10Q96BY6 2186 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 TM4SF18Q96CE8 201 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 METTL2AQ96IZ6 378 aaKnown RBP13.87□□□□□ -0.19
COL9A1-204ENST00000370496 PPP3R2Q96LZ3 170 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 CCT7Q99832 543 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 C20orf27Q9GZN8 174 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 KCNK13Q9HB14 408 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 MMP25Q9NPA2 562 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 THAP1Q9NVV9 213 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 SIRT5Q9NXA8 310 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 C5AR2Q9P296 337 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 PTGFRNQ9P2B2 879 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 DLGAP4Q9Y2H0 992 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.87□□□□□ -0.19
COL9A1-204ENST00000370496 CCL27Q9Y4X3 112 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 PCDHA9Q9Y5H5 950 aa13.87□□□□□ -0.19
COL9A1-204ENST00000370496 PIEZO2Q9H5I5 2752 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 ATP6AP2A0A1C7CYW4 349 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 NPIPB8E9PQR5 432 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 ATP6AP2O75787 350 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 GPR75O95800 540 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 PDGFAP04085 211 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 ALOX15P16050 662 aaPredicted RBP13.86□□□□□ -0.19
COL9A1-204ENST00000370496 STT3AP46977 705 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 IGLV3-21P80748 117 aaPredicted RBP13.86□□□□□ -0.19
COL9A1-204ENST00000370496 BIKQ13323 160 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 HEPACAMQ14CZ8 416 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 CRB2Q5IJ48 1285 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 C6orf163Q5TEZ5 329 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 NOXRED1Q6NXP6 359 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 SLC48A1Q6P1K1 146 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 Q6ZSR9 355 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 ST13P4Q8IZP2 240 aaPredicted RBP13.86□□□□□ -0.19
COL9A1-204ENST00000370496 B3GNT7Q8NFL0 401 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 OR4K14Q8NGD5 310 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 DNAJB14Q8TBM8 379 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 LRRC8CQ8TDW0 803 aa13.86□□□□□ -0.19
COL9A1-204ENST00000370496 TM9SF4Q92544 642 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms