RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 CDCA4Q9BXL8 241 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 HDHD5Q9BXW7 423 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 SLC6A16Q9GZN6 736 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 NXF2Q9GZY0 626 aaKnown RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 ANKRA2Q9H9E1 313 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 C3orf14Q9HBI5 128 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 SPATA6Q9NWH7 488 aaPredicted RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 MOSPD1Q9UJG1 213 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 GSTK1Q9Y2Q3 226 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 PCDHGB2Q9Y5G2 931 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 A0A1W2PQ72 361 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 ZSCAN5BA6NJL1 495 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 M0R3H8 397 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 MEN1O00255 615 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 SLC30A4O14863 429 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 RGS13O14921 159 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 ATG13O75143 517 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 PDE9AO76083 593 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 HBQ1P09105 142 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 MPC1LP0DKB6 136 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 NR2F1P10589 423 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 OSMP13725 252 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 IMPA1P29218 277 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 XCR1P46094 333 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 DGKGP49619 791 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 LIM2P55344 173 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 SP140Q13342 867 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 GINS1Q14691 196 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 TATDN3Q17R31 274 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 CRB2Q5IJ48 1285 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 LYPD8Q6UX82 237 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 B3GLCTQ6Y288 498 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 ZNF783Q6ZMS7 281 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 ARMCX6Q7L4S7 300 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 HSD11B1LQ7Z5J1 315 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 WDR53Q7Z5U6 358 aaPredicted RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 TMCO2Q7Z6W1 182 aaPredicted RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 IQCHQ86VS3 1027 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 GHDCQ8N2G8 530 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 CBARPQ8N350 705 aaPredicted RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 VWA5B2Q8N398 1253 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 GRPEL2Q8TAA5 225 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 C16orf78Q8WTQ4 265 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 CYB5D2Q8WUJ1 264 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 MAGEB10Q96LZ2 347 aaPredicted RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 SPATA9Q9BWV2 254 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 SRRQ9GZT4 340 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 MRPL17Q9NRX2 175 aaKnown RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 TXNL4BQ9NX01 149 aaKnown RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 CNOT2Q9NZN8 540 aaKnown RBP7.8□□□□□ -1.16
CD46-208ENST00000367042 DKK3Q9UBP4 350 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 ATP6V1HQ9UI12 483 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 SLC13A4Q9UKG4 626 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 CLCA2Q9UQC9 943 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 PRKAB1Q9Y478 270 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 MAU2Q9Y6X3 613 aa7.8□□□□□ -1.16
CD46-208ENST00000367042 A0A1B0GVC2 190 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 MANSC4A6NHS7 340 aaPredicted RBP7.79□□□□□ -1.16
CD46-208ENST00000367042 A6NIN4 97 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 ZAR1LA6NP61 321 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 C12orf71A8MTZ7 269 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 ISM1B1AKI9 464 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 ZNF670-ZNF695F2Z2N8 137 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 GFYI3L273 518 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 RFXAPO00287 272 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 INPPL1O15357 1258 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 GABRB1P18505 474 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 DDOSTP39656 456 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 POLR2LP62875 67 aaKnown RBP7.79□□□□□ -1.16
CD46-208ENST00000367042 FCHO2Q0JRZ9 810 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 IRF5Q13568 498 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 SEC23BQ15437 767 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 SLX4IPQ5VYV7 408 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 DDX53Q86TM3 631 aaKnown RBP7.79□□□□□ -1.16
CD46-208ENST00000367042 PDZD3Q86UT5 571 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 PHC2Q8IXK0 858 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 TIGD4Q8IY51 512 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 ELMOD2Q8IZ81 293 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 OR4C15Q8NGM1 316 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 SETD6Q8TBK2 473 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 OMA1Q96E52 524 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 RAD9AQ99638 391 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 BHLHE41Q9C0J9 482 aaPredicted RBP7.79□□□□□ -1.16
CD46-208ENST00000367042 KCNK12Q9HB15 430 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 IL20RAQ9UHF4 553 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 OR51B4Q9Y5P0 310 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 V9GYH0 126 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 MKI67P46013 3256 aaKnown RBP7.79□□□□□ -1.16
CD46-208ENST00000367042 MN1Q10571 1320 aaPredicted RBP7.79□□□□□ -1.16
CD46-208ENST00000367042 LOC102723532A0A0G2JNH3 316 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 A0A1W2PRU2 124 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 KPNA3O00505 521 aaPredicted RBP7.79□□□□□ -1.16
CD46-208ENST00000367042 GPR37L1O60883 481 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 POP4O95707 220 aaKnown RBP7.79□□□□□ -1.16
CD46-208ENST00000367042 CSF3P09919 207 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 PRKAR1AP10644 381 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 CBLP22681 906 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 PRPH2P23942 346 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 SLC16A1P53985 500 aa7.79□□□□□ -1.16
CD46-208ENST00000367042 RPS25P62851 125 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms